Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2638 ATGAAAAGCACACTCACAAAACCATTCATCATAAGGTGTTTTCTCGTATCCCTCTTCCTCTCCCTCCCCTTCCTCTGCCTCCACCTACTCTCTCCCCACCATTCCCACGTGACTACCACAACCAAAGACCTCAGAATCCGACCCGGTTACTCCTCCTACGAGGCCTACATACGGCGCCAGCTGAACAAGACCCTCAACCCGCGGCTCCGAAAAATATGGACAATCCGCGACTGGAACCGGAAGATCCCGGTTTTCGGTCGCTTCTTCGAGGACCTTAAGGACAAGATGCTTCTCGAGAACGCGTCGAAGGCGCTGTGCATCGGCGCGCGCGTGGGCCAAGAGGTGGAGGCGCTGAGGGCGAATCGGCGTGGCCGACTCCGTGGGAATCGACCTCGTTCCTTCTCCAACGCGTTCGATCACGCGCTGTACCCGGAACGCTTCGTGGCCGAGATCGAACGCACCTTGAAGCCCAGCGGCGTGTGCGTCTTGCACGTGGCGTTGTCCAGGCGCGCTGATAAGTACTCCGCTAACGACCTCTACAGCATCGAGCCCCTCGTCGCGCTCTTTAAGAACTCCGCTTTGGTTCACGTTCGCAGCGTCGATGGTTTCGGGTTGGACACCGAGGTTGCGTTTCGTAAGAACATGGAACCTCCTCCTCATTCTGTCCGTTAA 672 0.5744 MKSTLTKPFIIRCFLVSLFLSLPFLCLHLLSPHHSHVTTTTKDLRIRPGYSSYEAYIRRQLNKTLNPRLRKIWTIRDWNRKIPVFGRFFEDLKDKMLLENASKALCIGARVGQEVEALRANRRGRLRGNRPRSFSNAFDHALYPERFVAEIERTLKPSGVCVLHVALSRRADKYSANDLYSIEPLVALFKNSALVHVRSVDGFGLDTEVAFRKNMEPPPHSVR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2638 223 Gene3D Vaccinia Virus protein VP39 133 212 IPR029063 -
Ssu5g2638 223 PANTHER - 133 214 - -
Ssu5g2638 223 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 201 IPR029063 -
Ssu5g2638 223 PANTHER - 7 119 - -
Ssu5g2638 223 PANTHER F21J9.14 133 214 - -
Ssu5g2638 223 PANTHER F21J9.14 7 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2638 Ssu-Chr5 71297201 71297942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2638 - - gmx:100811557 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2638 5 71297201 71297942 Ssu5g2638 5 71297201 71297942 ECH