Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2312 ATGGATTGGCAAGGGCAAAAGCTAGCGGAGCAACTGATGCAGATAATGCTGCTTGCATTTGCTGTGATTGCATTTGCAAGTGGATATGTCATGGCTTCTTTCCAGATGATGATTCTCGTATACGCTGGGGGTGTGGTTCTCACCACATTGCTCACTGTCCCCAATTGGCCCTTTTTCAACCGTCATCCTCTTACGTGGTTGGATCCAAGTGAGGTAGAAAAACATCCCAAGCCACAACCATCTGCCAATGTAACTCAAAAGAAGAAACCTGTTAAgaagtag 282 0.4468 MDWQGQKLAEQLMQIMLLAFAVIAFASGYVMASFQMMILVYAGGVVLTTLLTVPNWPFFNRHPLTWLDPSEVEKHPKPQPSANVTQKKKPVKK 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2312 93 MobiDBLite consensus disorder prediction 69 93 - -
Ssu5g2312 93 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 1 89 IPR009542 GO:0005787|GO:0006465|GO:0016021
Ssu5g2312 93 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 70 IPR009542 GO:0005787|GO:0006465|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2312 Ssu-Chr5 65541203 65541484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2312 K12946 - gmx:100526911 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1807 9 55410442 55410723 Ssu5g2312 5 65541203 65541484 PCT