Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2296 ATGTCTCCCACTCCTTCCAGGAGCAGCAGTTATATTCATAGTCATGATCGAGACCAATTTAGTTCACGCAGCAAAGGTTCGGTTGTATCTTCTGGTGATGATGAGCTGGGCTCTCTTCAGTCCATCCCAGTGGATAGTCTAGACCGATTGGGTTCAAGAAGAGGTGGTTCATTTTCAAACAGCAACTCTCCTTCAATTTCCAAGAAGTCAGCCAGGATGTTGTCCCCAAGTTCTGCTCctaaaagatattttgattCTGCTCTCCGGCAAATGGATAGAAAAAGTCCTCAGAACATGTTCAGGCCTCTTTTATCAAGTGTGCCAAGTACAACCTTTTCTGTCGGAAAAGCAAATTCTGCACAACGTTCCCTGGTATCTAGGAACTCCTCTGTTACAACAAGCAGCAATGCGAGCTCTGATCATGGTACAAGTTTTGCACCAGATACTGAAGGGAGTGACCACAATCAAGATGATGTGGTGAGTGAAACTGAGAAGATATTGTACACTGATATTCATGAAGAAGTATTTTCCTTTGATAAAATTGATGTATTAAATGCAAACATTGGGCATGAGATCAATGATGAATCAGTTGATGTCCTGCACAATAAAACTAGAGGCCCTATGATTGCTTTAGGTCCCACTGAATCTGAAGCTTCTATTTATCATGGTATTGACAAAGAATTCAATGAAAGTTTAGAACCTTTCCATGTCATAGGTGATATTTCTGAAACTGGTGGTTTTGAGAATACAGCATTCTGTTCTAGTTGTGGTTGCCCTCTTGAGGCCACTGATCAAACTGAGGAGAATCTTAGACTATGTCCAGAATGCATCAGGAAAACCACATTGTTGAGACATATCATTCCAGAGGCAACTTTGGCAGTTTCCAATGGCAATTCAGTGATTTCCACAAACAGTCCTGCAGAAGAAAAACCATCAGCTGAAACAGACCAACTAACTGTTGTGTCTGAACTGCCTCAAGAGACTGATGTGGGTAGCATGAGGTTTCCCCATGGTGAATCGGATGCTGAGGAAAGTCAAACTTTTCCCAGTGAATTTATTCAGGACCATTCACAACAAAATCCTCTGTCAAGTTCACTGGTGGAGAGAAGTGGGCAGATGCTTACCAATCAGCTAGAGGTGGACCAGTCAGGGGTTGATTACAAGAAGCCTGATAATCATTCTGGGGATCAGCAGTCGTATTTTTCCAAAGACCGCTCAAATTTGAAAGCAGACCTCTTGGAAGGCACTGGCATTTCTGTACTACTGAAAAGGTCAAGCAGTAACAAAGGACCTGTAATTCAGGGCAGGACTTTTACTGCCACAACACTATCTTATGATGATCTTTCTTTTGCAAGAAAGAGTGTTAACAGTATTAGAAGCTCAGTTGGGCGTAGCAGTTATTCTACCTCATCATCAGTCGATTTCAGCTCAGCAAGACATTCTGATTTTCGTGTCCAAAGGCAGTCAAGTGGCAGGAAATTGGATGTAGACTATGGATATGACGTTAGGATCAAGCCTCCAAGCCCTGGTTCATCTTTTTCTGGAATGTCAAATCATTCTTACCATGGATTAGGTTTTGCTACACAAGAAACTTCTTCTGGCAATACAGAATGTGGCAACCTGGAGGAGATACCCCAAAATCTACAAGAAATGCAAGCTTCAGAAAATACAGTGATAGATGTGATTGATTCTTCTTCTATGGGTTCGATTGTTGTCAAGGAAGATAAACTTGAATATCATGATTGTGGTAGAACAACTGATGCTCGTAGCTCAGAATTAGTAAACCAGGCTACTGGTGTTCAGCCTGACGACAATTCAGTGGCATCATTTCCAAATCATGGGAGTTGTATTTCAAATGATAGTATTGAGACCATCCAAATAATGTAA 1887 0.4134 MSPTPSRSSSYIHSHDRDQFSSRSKGSVVSSGDDELGSLQSIPVDSLDRLGSRRGGSFSNSNSPSISKKSARMLSPSSAPKRYFDSALRQMDRKSPQNMFRPLLSSVPSTTFSVGKANSAQRSLVSRNSSVTTSSNASSDHGTSFAPDTEGSDHNQDDVVSETEKILYTDIHEEVFSFDKIDVLNANIGHEINDESVDVLHNKTRGPMIALGPTESEASIYHGIDKEFNESLEPFHVIGDISETGGFENTAFCSSCGCPLEATDQTEENLRLCPECIRKTTLLRHIIPEATLAVSNGNSVISTNSPAEEKPSAETDQLTVVSELPQETDVGSMRFPHGESDAEESQTFPSEFIQDHSQQNPLSSSLVERSGQMLTNQLEVDQSGVDYKKPDNHSGDQQSYFSKDRSNLKADLLEGTGISVLLKRSSSNKGPVIQGRTFTATTLSYDDLSFARKSVNSIRSSVGRSSYSTSSSVDFSSARHSDFRVQRQSSGRKLDVDYGYDVRIKPPSPGSSFSGMSNHSYHGLGFATQETSSGNTECGNLEEIPQNLQEMQASENTVIDVIDSSSMGSIVVKEDKLEYHDCGRTTDARSSELVNQATGVQPDDNSVASFPNHGSCISNDSIETIQIM 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2296 628 MobiDBLite consensus disorder prediction 461 484 - -
Ssu5g2296 628 MobiDBLite consensus disorder prediction 23 37 - -
Ssu5g2296 628 MobiDBLite consensus disorder prediction 1 79 - -
Ssu5g2296 628 MobiDBLite consensus disorder prediction 118 150 - -
Ssu5g2296 628 MobiDBLite consensus disorder prediction 53 74 - -
Ssu5g2296 628 MobiDBLite consensus disorder prediction 461 488 - -
Ssu5g2296 628 MobiDBLite consensus disorder prediction 381 402 - -
Ssu5g2296 628 PANTHER GASTRIC MUCIN-LIKE PROTEIN 1 624 - -
Ssu5g2296 628 MobiDBLite consensus disorder prediction 118 159 - -
Ssu5g2296 628 PANTHER RUN/FYVE DOMAIN PROTEIN 1 624 - -
Ssu5g2296 628 MobiDBLite consensus disorder prediction 297 347 - -
Ssu5g2296 628 MobiDBLite consensus disorder prediction 297 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2296 Ssu-Chr5 65275047 65277644 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2296 - - gmx:100810674 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1794 9 55249647 55251694 Ssu5g2296 5 65275047 65277644 PCT