Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1838 atggagGTACGTGAGCTTGGGAGAACCGGACTGAAACTGAGCTGCGTTGGGTTCGGAGCTTCCCCCCTGGGCAATGTCTTCGGCACTGTTTCCGAGGAACAAGCCATCGCTTCTGTTCGCCTCGCCTTTCAATCCGGCATCAACTTCTTCGACACTTCTCCGTATTACGGAGGGACACTGTCAGAAAAAGTGCTGGGGAAGGCATTAAAGGCTCTGGGAGCTCCTAGAAATTCGTACGTTGTGGCAACGAAGTGCGGACGGTACAAGGAGGGCTTCGATTTCAGCGCGGAGAGAGTAACGAGGAGCATAGAAGAGAGCCTGGAGAGGTTGCAGCTTGACTACGTTGACATTCTCCAGTGCCACGACATCGAGTTCGGCTCTTTAGACCAGGTTGTGAATGAGACGATTCCTGCGCTTGTGAAACTGAAGGAAGCGGGGAAGACGCGGTTCATTGGCATTACGGGGCTTCCTCTGGGCATTTTCAGCTACGTGCTTGATAGGGTTCCGCCTGGGACACTCGATGTTGTGCTCTCGTATTGCCATTACTGTGTGAATGACTCTAGCTTGGGGGATTTGGTGCCCTATTTGAAGGAGAAAGGGGTTGGCATCATCAATGCTTCTCCGTTGTCTATGGGCCTTCTCACTCAGGACGGCCCACCGGAATGGCATCCCGCCTCGCCACAACTCAAGTCTGCATGTCAAGCTGCTGCCGCTCATTgtaaagaaaagggaaaaaacatTTCAAAGTTAGCATTGCAGTACAGCTTGTTAAATAAGGAAATCACATCAGTGCTTGTAGGCATGAAATCTGTTGAACAGGTGGAGGAAAATGTCACTGCCGCAAGAGAACTTGCAACTTCTGGAATTGATGAAGAGGCGTTGTCTGAAGTTGAGTCTATTCTGAAGCCTGTTAAAAACCAGTCATGGCCTAGTGGAATCCAGCAGAGCTGA 951 0.4963 MEVRELGRTGLKLSCVGFGASPLGNVFGTVSEEQAIASVRLAFQSGINFFDTSPYYGGTLSEKVLGKALKALGAPRNSYVVATKCGRYKEGFDFSAERVTRSIEESLERLQLDYVDILQCHDIEFGSLDQVVNETIPALVKLKEAGKTRFIGITGLPLGIFSYVLDRVPPGTLDVVLSYCHYCVNDSSLGDLVPYLKEKGVGIINASPLSMGLLTQDGPPEWHPASPQLKSACQAAAAHCKEKGKNISKLALQYSLLNKEITSVLVGMKSVEQVEENVTAARELATSGIDEEALSEVESILKPVKNQSWPSGIQQS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1838 316 PANTHER GH17980P-RELATED 1 313 IPR020471 GO:0016491
Ssu5g1838 316 Gene3D - 1 313 IPR036812 -
Ssu5g1838 316 SUPERFAMILY NAD(P)-linked oxidoreductase 1 303 IPR036812 -
Ssu5g1838 316 CDD AKR_galDH 1 295 IPR044479 GO:0010349
Ssu5g1838 316 Pfam Aldo/keto reductase family 16 282 IPR023210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1838 Ssu-Chr5 54782291 54785393 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1838 K17744 - gmx:100809400 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1838 5 54782291 54785393 Ssu5g1838 5 54782291 54785393 ECH