Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1782 ATGGCCGTAGCTGACCCCAAGCCTCACTCCGAACCTAAGGTCTGGAATTTCTTCAAGCTTCCGTTTCGCCATTCTGGCTCTGGCGCCAGTACGACGTCGTCTTCTGCTAACCTTCATCACCACCACAACCCTAATAACCCTCACAATCTTCCCCTCGAGGGTTCCACTTCCCACACCCCGAATTCCGTTTCTTCCGTTGCGAGATCTTTTCTCCCAAGACGACGTCGTCTCAAGCTTGATCCCTCCAACAAGCTTTACTTCCCTTATGAGCCGGGCAAACAGGTTAGGAGTGCCATCAGGATTAAAAACACCAGTAAATCTTATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAAAGCTGTTTCATGCGTCCTCCTGGGGCTATCCTTGCACCTGGTGAGAGTATCATAGCAACAGTGTTCAAGTTTGTAGAGCTACcggaaaataatgaaaaacctGAAAAAACtggactcaaatttaaaatcatgagcTTGAAGGTGAAAGGATTAATTGATTACGTCCCTGAACtgTTTGATGAGCAGAAGGACCAAGTAGCAGTGGAGCAGATATTGCGAGTTGTTTTTCTAGATCCAGAGCGTCCTACTCCTGCTTTGGAAAAACTGAACCGACAGCTGGCTGATGCTGATGCCGCCCTTGAGGCACGTAAGAAACCTGCGGAAGATACAGGTCCTAAAATTATTGGGGAAGGGCTCGTCATAGACGAATGGAAAGAGAGGAGGGAAAGATACCTCGCAAAGCAGCAGGGTGAAGTGGTTGTAGATTCTGTATAG 792 0.4533 MAVADPKPHSEPKVWNFFKLPFRHSGSGASTTSSSANLHHHHNPNNPHNLPLEGSTSHTPNSVSSVARSFLPRRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSYVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVELPENNEKPEKTGLKFKIMSLKVKGLIDYVPELFDEQKDQVAVEQILRVVFLDPERPTPALEKLNRQLADADAALEARKKPAEDTGPKIIGEGLVIDEWKERRERYLAKQQGEVVVDSV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1782 263 MobiDBLite consensus disorder prediction 26 68 - -
Ssu5g1782 263 Pfam MSP (Major sperm protein) domain 77 186 IPR000535 -
Ssu5g1782 263 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 34 255 - -
Ssu5g1782 263 Gene3D Immunoglobulins 72 200 IPR013783 -
Ssu5g1782 263 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 34 255 IPR016763 GO:0005789
Ssu5g1782 263 SUPERFAMILY PapD-like 65 205 IPR008962 -
Ssu5g1782 263 ProSiteProfiles Major sperm protein (MSP) domain profile. 76 196 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1782 Ssu-Chr5 53368533 53373158 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1782 - - gmx:100808835 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1782 5 53368533 53373158 Ssu5g1782 5 53368533 53373158 ECH