Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1739 ATGGCTTCGTCTCTGTTACTGGCGGTGGTGTTTGTGTTTGATCTGATTGCTTTTGGTCTCGCCGTTGCTGCAGAGCAGAGAAGGAATACTGCCACGTTAGCTAAAGACACTGCAGGTAGAGACTACTGTCAGTATGACTCTGACATTGCAACCGGCCTAGGTGTGGGGTCCTTGTTTATCCTAGTTGCCAGTCAAGTGATCATTATGGTTGTAACTAGATGCCTGTGCTGTGGGAAAGCTATGAGACCCAGTGGATCAAGATCATGGGCAATTTGCTTATTCATCACTAGCTGGGTGACATTTATCATTGCTGCTTCGTGCCTGCTAGCGGGTTCTGTAAGGAATGCTTACCATACTAAGTACCGTGATCTTATGGGAGAGAGAGCCCCTTCATGTCAGACCTTGAGGAAAGGAGTGTTTGCAGCTGGAGCTGCTTTCATTGTTTTCACAGGCATAACCTCGGAGCTTTATTATGTTAGTTTTTCAAAAGCTAATAATGGTCCCCCTCCCTATGCTCGGGACACTGGTGTGAGGATGGGCAATTTGTAG 549 0.4699 MASSLLLAVVFVFDLIAFGLAVAAEQRRNTATLAKDTAGRDYCQYDSDIATGLGVGSLFILVASQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITSWVTFIIAASCLLAGSVRNAYHTKYRDLMGERAPSCQTLRKGVFAAGAAFIVFTGITSELYYVSFSKANNGPPPYARDTGVRMGNL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1739 182 Pfam Protein of unknown function (DUF1218) 58 151 IPR009606 -
Ssu5g1739 182 PANTHER 1,3-BETA-GLUCAN SYNTHASE COMPONENT (DUF1218) 1 182 - -
Ssu5g1739 182 PANTHER OS07G0462200 PROTEIN-RELATED 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1739 Ssu-Chr5 52058147 52067662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1739 - - gmx:100817583 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1739 5 52058147 52067662 Ssu5g1739 5 52058147 52067662 ECH