Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1715 ATGTATAACAAAGATATTTGCATTCTTGATCCATATTTAATAGCTCTATTGATACTGGTTCATTTCTTTGAGAAAGTCTATTCACTCCTTAGAGAAGGGAAGAAAAGCAAAGTGGTGACATTGGAAGGGAACATACAGCCAAAGGAAGAGGCAAAGATGTTGGCAATTTTCAAGGAGAAGTTGGTCAATCCACCAGAAGAGCTAAACAGCCCAGCTTCTTTGAATTCATCAAAAAGGTCTAAACTTCCAAATGAAATCCTTCAGGAATTCCAATCCTACAATCCCTCCAATGCTTTCTCTCTGAGCTTTGGAAATGATGCTTTGCTGGCTTATTCCCCTTCAAACAAGCCCTCCATTCATCACGGGTTTTGTGTTTTGGATAACATATACTGCATGTTCCTTGGGAGCCTAAACAACCTAAGCAGGCTCATCAAGCAGTATGGTCTGTCAAAGGGAACCAATGAAGCGATGTTTATCATAGAAGCCTATAGGACACTTCGTGACAGGGGTCCATACCCAGCTGATCAGGTCCTCAAAGAACTTGAAGGCAGTTTTGGATTTGTGATCTATGACAATAAGGATGGAACAGTTTTTACTGCACGGGGTTCTAATGGCCAGATTGAGCTTTTCTGGGGTATTGCAGTTGATGGTTCTGTAGTTATTTCTGAGAATTTGGAGCTTATAAAGGCAAGCTGTGCTAAATCATTTGCTCCATTCCCCACTGGGTGTATGTTTCATAGTGGGCATGGTCTAATGAACTATGAGCATCCTACGAGGAAGATGAAGTCAATGCCTAGAGTTGATAGCGAGGGGGTTATGTGTGGGGCCAACTTTCTTGTGGACTCCCAATCAAGGAAGTCAATGATGCCCCGTGTTGGAAGTGAAGCCAATTGGGCTACTTGGGGCTCACAAGCCTGA 918 0.4281 MYNKDICILDPYLIALLILVHFFEKVYSLLREGKKSKVVTLEGNIQPKEEAKMLAIFKEKLVNPPEELNSPASLNSSKRSKLPNEILQEFQSYNPSNAFSLSFGNDALLAYSPSNKPSIHHGFCVLDNIYCMFLGSLNNLSRLIKQYGLSKGTNEAMFIIEAYRTLRDRGPYPADQVLKELEGSFGFVIYDNKDGTVFTARGSNGQIELFWGIAVDGSVVISENLELIKASCAKSFAPFPTGCMFHSGHGLMNYEHPTRKMKSMPRVDSEGVMCGANFLVDSQSRKSMMPRVGSEANWATWGSQA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1715 305 SMART DUF3700_2 54 280 IPR024286 -
Ssu5g1715 305 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 107 255 IPR029055 -
Ssu5g1715 305 PANTHER NUCLEOPHILE AMINOHYDROLASE-RELATED 53 304 - -
Ssu5g1715 305 PANTHER ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS 53 304 IPR044828 -
Ssu5g1715 305 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 125 249 IPR029055 -
Ssu5g1715 305 Pfam Aluminium induced protein 54 280 IPR024286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1715 Ssu-Chr5 51745790 51747827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1715 - - gmx:100776430 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1715 5 51745790 51747827 Ssu5g1715 5 51745790 51747827 ECH