Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1106 ATGAGCCAAAGTATCTTCCACCAGACCGTGCTTTGTCAGACGCAAACGGTTGCGGAGCATCAAAGTAAGGTTAGTTCCTTCGCGTTGGGTGTGAACAAAGGAAAGAACCCTTTGCTTTCTACAAATTTTCGCGGGAACAGGTTGTGTGTTAGGAAACGCAAATTAGTCATGGGAAGGCACCGCCACGTCGACGCTATTCCACGCGCTGTGTTAACCACCAATCTAGCTTCTGAGCTTTCTGGGAAGTTCAACCTTGATGGAAATATTGAGTTGCAGGTTGGTGTTAGTTCTTCAGTACCAGGAGCTGCAACACAAGTAGATATTAAGGTTTCATATAATAGTGACTCTCTGCTTTTACATTGGGGAGTTGTGCGTGATCAGCCAGGGAAGTGGATTCTTCCTTCTCATAGCCCAGATGGAACTAAAGTTTATAAGAACAGAGCTCTTAGAACTCCTTTTGTGAAATCTGACTCGGGATCCTTccttaaaatagaaattgacgATCCTGCTGCACAAGCCATTGAGTTCCTCATACTTGATGAGGCTAAAAATAAGTGgtttaaaaataatggtCAGAACTTTCACATCAAGTTACCAGTAAAAAATAAGCTATCTCAAGAAGTTTCAGTTCCTGAGGACCTTGTACAGATTCAAGCATATCTTAGGTGGGAACGAAAGGGTAAGCAGATGTACACTCCAGAGCAAGAGAAGGAGGAATATGAAGCAGCTCGACGTGAACTATTGGAGAAAGTAGCTAGGGGTACTTCTGTACAAGATCTCCGTGCAAAGTTAACTAACAAAACTAATGCTGCTGAAGTAAAGGAGACTTCTGTTTCTGAAGCAGAGACTTCTGTTTCTGAAGCAGAGAAGCCTTCTGTTTCTGAAGCAGAGAAGCCTTCTGTTTCTGAAGCAAAGACCATCCCTGATGAACTTGTACAGATTCAAGCTTACATACGCTGGGAAAAAGCTGGGAAGCCTAACTACTCTCAGGAACAACAACTTATGGAATTTGAGGAAGCAAGAAAAGAACTGTTAGCAGAGCTTGAGAAGGGTGCTTCTCTGGATGAGATACGGAAGAAGATTATCAAAGGAGAGATACAAACTAAAGTTGCCAAgcaattgaaaactaaaaaatacttTCGTGCTGAAAGAATACAGAGGAAAAAGAGAGATTTGATGCAGCTTATCAACCGAAATGTTGCTGAAAGTATagatgaaaaatttatagatGCTCCAGCTCCAAAAGCCTCAACAGTAATTGAACATTATGCCAATGCAAGGGAAGAATATGAAAGTGGCCTTGTTTTGAATAAGGAAATATACAAGCTTGATGATAATGATCTTCTGGTCCTCATTACCAAGGATGCTGGTAAGATTAAGGTTCACCTGGCTACAGATTCGAAAAAACCTTTTGCACTTCACTGGGCATTATCTAGAACATCTGAAGAGTGGTTGGTACCACCTGCAACTGCTCTGCCCCCTGGATCTGTTACTATGAATGAGGCTGCTGAAACACCTTTCAAAGCTGGTTCCTTGTCTCATCCTTCTTATGAGGTCCAGTCCTTGGATATAGAGGTTGATGATGATACTTTTAAAGGAATGCCTTTTGTCATTCAGTCAGACGGAAAATGGATGAAGAACaatggatcaaatttttatattgaatttggtGGGAAGAAGCAGATACGAAAGgATTTTGGCGATGGCAAAGGTACAGCCAAGTTCTTGTTGGATAAAATAGCAGAAAAGGAAAGTGAGGCACAAAAGTCCTTCATGCATCGaTTTAACATTGCATCAGATGTGATAGATGAAGCCAAAAATGCTGGTCAACTGGGTTTTGTGGGGATTTTGGTGTGGATGAGATTCATGGCTACAAGGCAGCTCATATGgaacaaaaattacaatgtgAAGCCACGTGAGATAAGTAAAGCACAGGATAGGCTTACAGACTTGCTCCAGGATGTTTATGCAAGTTATCCACAATATAGGGAAACTGTGAGGATGATCTTGTCTACTGTTGGTCGTGGAGGTGAAGGAGATGTTGGACAGAGGATTCGGGATGAAATCCTTGTTATCCAGAGAAAGAATGATTGCAAAGGTGGAATGATGGAGGAATGGCACCAGAAGTTACACAACAATACTAGTCCTGATGATGTTGTAATCTGTCAGGCactaattgattatataaatagtgACTTTGATATTGGTGTTTACTGGAAAACATTGAGTGACAATGGAATAACAAAAGAACGGCTTCTGAGCTATGACCGTGCCATCCATTCTGAACCAAATTTTAGGAGAGATCAGAAGGAAGGTCTTCTGCAAGATCTGGGAAACTACATGAGGACTTTGAAGGCAGTTCATTCTGGTGCAGATCTTGAATCTGCTATTTCAAATTGTATGGGCTACAAATCTGAGGGTCAGGGCTTCATGGTAGGGGTGCAGATAAATCCAGTGCCGGGTTTGCCTACTGGTTTTCCAGAATTACTCGAGTTTGTCATGGAACACGTTGAAGATAAGAATGTTGAACCACTTCTTGAGGGATTACTTGAGGCTCGTCAGGAACTCCGACCATCACTCAGTAAATCCCAAAGTCGTCTGAaagatcttttatttttggatgtTGCCCTTGATTCTATGGTTAGAACAGCAGTGGAAAGGAGTTACGAGGAATTAAACAATGCTGGACCTGAGAACATTATGTACTTCATTTACTTGGTTCTTGAAAATCTTGCACTTTCATCGGATGACAATGAAGATCTTATCTACTGTCTGAAGGGATGGGATCTTGCCTTAAGCATGTGCAAGAGTAAAGATACTCATTGGGCATTGTATGCAAAATCAGTCCTTGACAGAACACGCCTTGCACTCACAAACAAGGCTCATTTATACCAGCAAATTCTGCAACCATCGGCAGAATACCTTGGATCACTGCTTGGTGTGGACAGATGGGCTGTGGAAATATTTACTGAAGAAATTATCCGTGCTGGATCTGCTGCTTCTTTGTCTACACTTCTAAATCGACTAGATCCTGAGCTCCGAAAGACAGCTAATCTCGGAAGCTGGCAGGTTATTAGCCCAGTTGAAACAGTTGGATATGTTGAGGTTGTAGATGAATTGCTTGCTGTTCAAAACAAATCATATGAGCGACCTACAATTTTGATAGCCAAGAGTGtgaaaggagaggaagaaatTCCGGATGGTACGGTTGCTGTCCTGACACCTGATATGCCTGATGTCCTATCCCATGTTTCTGTACGAGCAAGAAATAGCAAGGTGTGTTTTGCTACATGCTTCGATCCCAATATCCTGGCTAACCTCCAAGAAAATAAAGGCAAGCTTTTGCGCTTAAAGCCTACATCTGCTGATGTAGTTTACAGTGAGGTCAAGGAGGGTGAGTTTATTGATGACAAATCAACTCACCTGAAAGATGTTGGTTCTGTGTCACCCATATCTCTGGCCAGAAAGAAGTTTAGTGGTAGATATGCTGTCTCATCTGAAGAATTCACTGGTGAAATGGTTGGAGCTAAGTCTCGtaatatctcttatttaaaAGGGAAAGTAGCTTCTTGGATTGGAATTCCTACCTCAGTTGCCATACCATTTGGAGTTTTCGAACACGTTCTTTCTGATAAATCAAATCAGGCAGTGGCTGAGAGggtcaatattttgaaaaagaagttaATTGAGGGAGACTTCAGTGCTCTCAAGGAGATTCGTGAAACAGTTTTACAGTTGAATGCACCATCCCAGTtgGTAGAGGAgttgaaaactaaaatgaaaagttcTGGAATGCCTTGGCCGGGTGATGAAGGTGAACAACGCTGGGAACAAGCTTGGAAGGCTATAAAAAGtgaGAAAACCTTTATCATACTTGTGTGGGGCTCAAAGTGGAATGAAAGAGCATACTTCAGCACCAGAAAAGTGAAACTCGACCACGATTATCTTTCCATGGCTGTCCTTGTTCAGGAAGTGATAAATGCTGACTATGCTTTTGTCATCCACACAACTAACCCGTCCTCTGGAGATTCGTCAGAAATATATGCTGAGGTGGTAAAGGGACTCGGAGAAACACTGGTTGGAGCTTATCCTGGTCGTGCTTTGAGTTTTATCTGCAAAAAACGTGATTTGAACTCTCCTCAGGTCTTGGGTTATCCTAGCAAACCTATCGGCCTATTTATAAGACAGtcaattatttttagatctGATTCCAATGGTGAAGACCTAGAAGGTTATGCTGGTGCAGGCCTTTATGACAGGTAA 4263 0.4014 MSQSIFHQTVLCQTQTVAEHQSKVSSFALGVNKGKNPLLSTNFRGNRLCVRKRKLVMGRHRHVDAIPRAVLTTNLASELSGKFNLDGNIELQVGVSSSVPGAATQVDIKVSYNSDSLLLHWGVVRDQPGKWILPSHSPDGTKVYKNRALRTPFVKSDSGSFLKIEIDDPAAQAIEFLILDEAKNKWFKNNGQNFHIKLPVKNKLSQEVSVPEDLVQIQAYLRWERKGKQMYTPEQEKEEYEAARRELLEKVARGTSVQDLRAKLTNKTNAAEVKETSVSEAETSVSEAEKPSVSEAEKPSVSEAKTIPDELVQIQAYIRWEKAGKPNYSQEQQLMEFEEARKELLAELEKGASLDEIRKKIIKGEIQTKVAKQLKTKKYFRAERIQRKKRDLMQLINRNVAESIDEKFIDAPAPKASTVIEHYANAREEYESGLVLNKEIYKLDDNDLLVLITKDAGKIKVHLATDSKKPFALHWALSRTSEEWLVPPATALPPGSVTMNEAAETPFKAGSLSHPSYEVQSLDIEVDDDTFKGMPFVIQSDGKWMKNNGSNFYIEFGGKKQIRKDFGDGKGTAKFLLDKIAEKESEAQKSFMHRFNIASDVIDEAKNAGQLGFVGILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTDLLQDVYASYPQYRETVRMILSTVGRGGEGDVGQRIRDEILVIQRKNDCKGGMMEEWHQKLHNNTSPDDVVICQALIDYINSDFDIGVYWKTLSDNGITKERLLSYDRAIHSEPNFRRDQKEGLLQDLGNYMRTLKAVHSGADLESAISNCMGYKSEGQGFMVGVQINPVPGLPTGFPELLEFVMEHVEDKNVEPLLEGLLEARQELRPSLSKSQSRLKDLLFLDVALDSMVRTAVERSYEELNNAGPENIMYFIYLVLENLALSSDDNEDLIYCLKGWDLALSMCKSKDTHWALYAKSVLDRTRLALTNKAHLYQQILQPSAEYLGSLLGVDRWAVEIFTEEIIRAGSAASLSTLLNRLDPELRKTANLGSWQVISPVETVGYVEVVDELLAVQNKSYERPTILIAKSVKGEEEIPDGTVAVLTPDMPDVLSHVSVRARNSKVCFATCFDPNILANLQENKGKLLRLKPTSADVVYSEVKEGEFIDDKSTHLKDVGSVSPISLARKKFSGRYAVSSEEFTGEMVGAKSRNISYLKGKVASWIGIPTSVAIPFGVFEHVLSDKSNQAVAERVNILKKKLIEGDFSALKEIRETVLQLNAPSQLVEELKTKMKSSGMPWPGDEGEQRWEQAWKAIKSEKTFIILVWGSKWNERAYFSTRKVKLDHDYLSMAVLVQEVINADYAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFICKKRDLNSPQVLGYPSKPIGLFIRQSIIFRSDSNGEDLEGYAGAGLYDR 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1106 1420 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC-RELATED 298 1419 - -
Ssu5g1106 1420 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC-RELATED 40 290 - -
Ssu5g1106 1420 Coils Coil 327 347 - -
Ssu5g1106 1420 MobiDBLite consensus disorder prediction 268 304 - -
Ssu5g1106 1420 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC 298 1419 - -
Ssu5g1106 1420 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC 40 290 - -
Ssu5g1106 1420 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 1292 1361 IPR002192 GO:0005524|GO:0016301|GO:0016310
Ssu5g1106 1420 Gene3D - 1326 1411 - -
Ssu5g1106 1420 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 1172 1363 - -
Ssu5g1106 1420 MobiDBLite consensus disorder prediction 268 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1106 Ssu-Chr5 35404299 35419654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1106 117 303 Glycoside Hydrolase AT1G69830 26.943 6.89e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1106 K08244 - gmx:100802675 2512.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1106 5 35404299 35419654 Ssu5g1106 5 35404299 35419654 ECH