Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1092 ATGGGATCTGAAGCCCCAAAGGCCATTACTATTCATGTAACaggatttaaaaagtttcaaggGGTTCCGGAAAACCCTACAGAAaccattgttaataatttgaaagaCTATGTTGAAAGGAGAGGCCTCCCTGCTGGTGTTACTCTTGGGAGTTGCACTGTGCTTGATGCGGCAGGGGAAGGTACACTTCCTCAGCTATATCAGACCATGGAATCTGCTATCTCCAAGACAGATGCTGTGAGCAATGCAAATGTTGTAtggCTTCACTTGGGGGTGAATAGTGGAGCTGTAAGGTTTTCCATTGAGCACCGGGCTGCAAATGAAGCCACTTTCCGCTGTCCAGATGAGTTAGGATGGCAACCGCAGCAAGTCCCAATAGTCCCTGAGGATGGAGGAATTTCTCGAGCAAGACAGACTTCTTTGCCCGTGGATGCAATCTTGAAATCCTTGAAGAAGGGAGCTTATGATGTGATGATATCAGGTGATGCAGGACGCTTTGTGTGCAATTATGTGTATTACCACTCCCTCCGATTCGCGGAACAGAAGGGTAACAAGTCTCTATTTGTCCATGTTCCCCTATTTTCAAGAATTGATCAAGAAACCCAGATGCGATTCACAGCCTCTCTTTTGGAGGCCATTGCTTCTGCATGTTAA 654 0.4388 MGSEAPKAITIHVTGFKKFQGVPENPTETIVNNLKDYVERRGLPAGVTLGSCTVLDAAGEGTLPQLYQTMESAISKTDAVSNANVVWLHLGVNSGAVRFSIEHRAANEATFRCPDELGWQPQQVPIVPEDGGISRARQTSLPVDAILKSLKKGAYDVMISGDAGRFVCNYVYYHSLRFAEQKGNKSLFVHVPLFSRIDQETQMRFTASLLEAIASAC 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1092 217 CDD Peptidase_C15 9 215 IPR000816 GO:0005829|GO:0006508|GO:0016920
Ssu5g1092 217 PIRSF Pyrrolidone-crbxlat_pptds 8 217 IPR000816 GO:0005829|GO:0006508|GO:0016920
Ssu5g1092 217 Gene3D - 8 217 IPR036440 -
Ssu5g1092 217 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 9 214 IPR036440 -
Ssu5g1092 217 PANTHER BNAA09G15240D PROTEIN 1 216 - -
Ssu5g1092 217 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 216 IPR016125 -
Ssu5g1092 217 Pfam Pyroglutamyl peptidase 11 195 IPR016125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1092 Ssu-Chr5 34614048 34616749 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1092 K01304 - gmx:100784344 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1092 5 34614048 34616749 Ssu5g1092 5 34614048 34616749 ECH