Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1087 ATGGCAGAGAACAAGGACCTCGAAACCGCGATCAGAAGGCTCGCCTCTGTAACCAGCCACCTCACGTCCTCTCCCACTGCCCCCGCCGAACTCGCCCTGTGCCGCACTTCCGTTAGGAACGACAGCTTCCAACGCGTCCACGGCGACGTTCCCTCCCACGACGTCGTTTGGAGGACCGCTTCCGACGACTCCGGCAAGGACTTCACCGACATTGTGTACGAGAAGGCCGTCGGGGAAGGAATAGCCAAGATAAGTATTAATAGGCCAGAGAGAAGGAATGCCTTCCGACCCCACACGGTGAAGGAGCTTATGCGTGCTTTCAGTTATGCCAGGGATGATAGCTCTATTGGGGTCGTCATTCTCACCGGCAAGGGAACCAAGGCATTTTGTAGTGGTGGTGACCAGGCTTTGAGGACTGACGATGGCTATTCTGATGATGGAAGTTTTAGTAACCTTAATGTGTTAGACTTGCAGGTGCAGATACGCCGCCTTCCAAAACCAGTGATTGCAATGGTAGCAGGTTATGCTGTTGGAGGAGGGCACGTATTACATATGGTCTGTGATCTAACTATTGCGGCAGATAATGCTATCTTTGGCCAAACTGGTCCTAAGGTAGGGAGCTTTGATGCTGGTTATGGAAGTTCTATCATGTCTCGTTTGGTAGGTCCAAAAAAAGCACGTGAAATGTGGTTTCTCACAAGGTTCTATGATGCTGTTGAAGCAGAGAAAATGGGCCTTGTCAACACTGTTGTACCGCTTGAGAATTTGGAGAAAGAAACGATAAAATGGTGTCGGGAGATACTGAGGAACAGTCCAACTGCTATTCGGGTGCTCAAGTCAGCTCTTAATGCAGTGGATGATGGACATTCTGGACTTCAGgaaCTTGGTGGACATGCAACACTGATATTCTATGGCACTGAGGAAGCTAAGGAGGGGAAGACTGCATATATGCAACGTAGACGTCCTGATTTTTCCAAGTTCAATCGGCGACCTTAA 996 0.496 MAENKDLETAIRRLASVTSHLTSSPTAPAELALCRTSVRNDSFQRVHGDVPSHDVVWRTASDDSGKDFTDIVYEKAVGEGIAKISINRPERRNAFRPHTVKELMRAFSYARDDSSIGVVILTGKGTKAFCSGGDQALRTDDGYSDDGSFSNLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYDAVEAEKMGLVNTVVPLENLEKETIKWCREILRNSPTAIRVLKSALNAVDDGHSGLQELGGHATLIFYGTEEAKEGKTAYMQRRRPDFSKFNRRP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1087 331 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 169 189 IPR018376 GO:0003824
Ssu5g1087 331 Gene3D - 53 270 - -
Ssu5g1087 331 Gene3D - 271 319 IPR014748 -
Ssu5g1087 331 SUPERFAMILY ClpP/crotonase 67 326 IPR029045 -
Ssu5g1087 331 Pfam Enoyl-CoA hydratase/isomerase 79 325 IPR001753 GO:0003824
Ssu5g1087 331 TIGRFAM menB: naphthoate synthase 68 327 IPR010198 GO:0008935|GO:0009234
Ssu5g1087 331 CDD crotonase-like 71 267 - -
Ssu5g1087 331 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 57 330 IPR010198 GO:0008935|GO:0009234
Ssu5g1087 331 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 9 331 IPR010198 GO:0008935|GO:0009234
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g1087 1 331 Acyl Lipid Metabolism Gene Families AT1G60550 76.261 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1087 K01661 - gmx:100782743 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1087 5 34520834 34525800 Ssu5g1087 5 34520834 34525800 ECH