Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1084 ATGATGGGTGAGTCAGAAGGGACAAAATTCAGCTTAAATGTCAGGATGGAGAAAGATGGGTTTCCAAGGGGACTAGATCCTgcaatatctaaattttttgtgCAGCTCCCAAGTGTTGTTAAGTCACGGCTAAGTAGATTAGCAAAACAGGATGGAAAGAGTTTGGTGAGATCTGTCCAAAGAAATTGGAATAAGTCTTTCAGTTACTCTGAAGCTGAACTGAATGAGCAACTGCAAGCATGGAGAGAAAATCCATCTTGGGTTGATAAGCCACCACTAGTAAAGGTCACTGTTCCGAAAGGTTCTCTTTGCAATCTCAATGTAGAAGTTGATGTTGGGCTGCCCCCTGATGCAGTATATAATATAGTGACAGATCCTGACAATAGgagagttttcaaaaatatcaaaGAAGTGATATCCAGAAAAGTTTTGGTTGATGAAGGTCATAGGCAAGTGGTTGATCTTGACCAAGCAGCCATTTGGAAATTTCTTTGGTGGTCTGGGACTATTTCGATTAATGTTTTGGTAGATCAAAACAGAAAAGACCACTCTATGAAGTTCAAGCAAACCAAGACAGGATTCATGAAAAAATTTGAGGGCTGCTGGAAGGTAGAGCCTTTATTTGTGGATGAAGCAATCTGCTATCCCTTTAAGCCCGTGACAAAGGAAGACTATAATGCATGCACAAGGGGCAAAGGAAGAATCGGATCTAAAGTTAGCCTGCAACAAATACTTCAACCAGCCATTGTCCCTCCCCCTCCCATATCATGGTATTTGAGGGGAATTACCGCCCGGACAACTGAGATGCTTATAAATGATCTGCTTGCAGAAACTGCTAGAATCAGAGGAGGATACGAGGCTGAAAAGTCTAAGGGAGAGGTGCTTCAGGTAAAACCTGATAAAAATGTGGACTTGGTTGCTAACACAAGGGACATTAAAGAAAGATGGATTTTACATAGACAAAATGCAAAGCAGAGTCGTAGAAGACTGCCGACTGCCAAGTGA 1005 0.406 MMGESEGTKFSLNVRMEKDGFPRGLDPAISKFFVQLPSVVKSRLSRLAKQDGKSLVRSVQRNWNKSFSYSEAELNEQLQAWRENPSWVDKPPLVKVTVPKGSLCNLNVEVDVGLPPDAVYNIVTDPDNRRVFKNIKEVISRKVLVDEGHRQVVDLDQAAIWKFLWWSGTISINVLVDQNRKDHSMKFKQTKTGFMKKFEGCWKVEPLFVDEAICYPFKPVTKEDYNACTRGKGRIGSKVSLQQILQPAIVPPPPISWYLRGITARTTEMLINDLLAETARIRGGYEAEKSKGEVLQVKPDKNVDLVANTRDIKERWILHRQNAKQSRRRLPTAK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1084 334 PANTHER PUTATIVE (DUF220)-RELATED 38 330 - -
Ssu5g1084 334 SUPERFAMILY Bet v1-like 107 207 - -
Ssu5g1084 334 Pfam Domain of unknown function DUF220 167 238 IPR003863 -
Ssu5g1084 334 Gene3D - 105 210 IPR023393 -
Ssu5g1084 334 PANTHER PUTATIVE (DUF220)-RELATED 38 330 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1084 - - gmx:100808684 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1084 5 34452752 34455041 Ssu5g1084 5 34452752 34455041 ECH