Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0971 ATGGAGGAGAAGAGATTCGGCGTGATAGGGTACGCGCTGGCGCCGAAAAAGCAGAACAGCTTCATCCGCGACTCATTGGTGAGTCTAGCGAAATCGCGAGGGATCGAACTGGTGCGCGTGAACTCCGAGAAGGCCCTCGCGGATCAGGGTCCATTCGATTGCGTCCTCCACAAGCTCTACGGCGACGATTGGAAACGCCAGCTCCGAGAATTCCAGGCTCGGTACCCAAATGCGGTTATCCTGGACGCGCCCGAAGCGATCGAGCGCCTCCACAACCGAATCTCGATGCTGCAGGTGGTGTCGGAGCTGAAAATTGAGGACCGAACCGAAACCTTCGGGATCCCGAAGCAGATTGTGATATACGACAAGGAGACGCTGCTGGACCCGCAGGCGTGGGAGAGTCTCAAGTTTCCGGTGATAGCGAAGCCGCTTGTCGCGGACGGCAGCGCGAAGTCGCACAAGATGGCGCTTGTGTTCACGCGCGATGCGCTGAACAAGCTGAAGCCGCCGATCGTGCTGCAAGAGTTCGTGAACCACGGGGGCGTGATCTTCAAGGTGTACGTGGTGGGCGAGCACGTGCGCTGCGTGAAGCGCAAGTCCCTCCCCGACGTGTCCAAGGAGAAGGCCCTCGGCGTTTCGGAGGACCTGCTGTCGTTTTCGCAGGTGTCCAACTTGGCCAACCACGACGCGCTAAGCGACAGCGACGGCTATTACCAGTTGATGCATTTGGACGACACCGAGATGCCTCCCAACGCCTTTGTCGTTGACATCGCCAGGGGCCTCAGGCAAGCCTTGAAGTTGAACCTCTTCAATTTCGATGTCATAAGGGACGCGCGATACGGGAACCGCTATCTCATCATTGATATTAACTATTTCCCTGGGTATGCCAAAATGCCTGGGTACGAGGCCGTTTTGACCGAGTTTTTCTGCGATGTAATGTTCCAGAAACAGCATGAGGGTGACGTTCCCGCGCCTAAGGAGAAAGAGGAATATCTTCaagtttaa 1005 0.5632 MEEKRFGVIGYALAPKKQNSFIRDSLVSLAKSRGIELVRVNSEKALADQGPFDCVLHKLYGDDWKRQLREFQARYPNAVILDAPEAIERLHNRISMLQVVSELKIEDRTETFGIPKQIVIYDKETLLDPQAWESLKFPVIAKPLVADGSAKSHKMALVFTRDALNKLKPPIVLQEFVNHGGVIFKVYVVGEHVRCVKRKSLPDVSKEKALGVSEDLLSFSQVSNLANHDALSDSDGYYQLMHLDDTEMPPNAFVVDIARGLRQALKLNLFNFDVIRDARYGNRYLIIDINYFPGYAKMPGYEAVLTEFFCDVMFQKQHEGDVPAPKEKEEYLQV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0971 334 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 108 310 IPR040464 -
Ssu5g0971 334 Gene3D - 85 294 - -
Ssu5g0971 334 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 8 87 IPR041429 -
Ssu5g0971 334 PIRSF ITPK 1 324 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Ssu5g0971 334 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 322 - -
Ssu5g0971 334 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 322 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Ssu5g0971 334 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 84 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0971 Ssu-Chr5 30077100 30078104 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0971 K00913 - gmx:100127430 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0971 5 30077100 30078104 Ssu5g0971 5 30077100 30078104 ECH