Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0849 ATGCAGCGTGCGGCGACGACAGAGGATCCGCGGCGGCGCTCCGGCGACGCGGCGACCGAGGGGGAGAAGATGTTCAAAGGCAGCGAGGAATTCGCTGACACGTCATCTAATTATTTGAAGACGGTTTTGGCCCTGGCGTTGTGGCTCGGAGCCATTCATTTCAACGCCGCGTTGATGCTCTTCGCagttctcttcctctctctccaCCAAGCACTCTTGCTTTTTGGTTTGCTTTTCGTGTTGATGGTGATCCCTGTGGATGAAAAGAGCAAATTCGGTCGAAAATTATCCAgGTACATATGCAAGCACGTTTGCGGGTACTTTCCCGTCACGCTTCATGTAGAGGATATAAAGGCCTTCCATCCCAATCGTGCTTATGTTTTTGGTTATGAACCACATTCAGTTTTGCCAATTGGAGTTGTTGCATTAGCTGACAGCACAGGTTTTATGCCTCTTCCTAAAATAAAAGTTCTTGCTAGCAGTGCGGTATTTTACACTCCATTTTTGAGACACATATGGACGTGGTTGGGTCTGACACCGGCAACAAAGAAAAGGTTTACCTCCCTGTTGGATGCTGGCTATAGTTGTATCTTAGTACCTGGTGGAGTGCAAGAAACATTTCTCATGGAGCATGGTTATGAGATTGCCTTTCTTAAGGCAAGAAGAGGATTTATCCGCATAGCAATGGAGAAGGGCAAACCCCTGGTTCCAGTTTTCTGCTTTGGGCAGTCAAATGTCTATAAGTGGTGGAAACCAGGTGGGAAGTTAATTCTGAATTTTGCAAGGGCTATCAAGTTCACCCCAATATATTTTTGGGGAATTTTCGGATCTCCGTTACCATTTAAACGTCCAATGCATGTGGTGGTTGGTAGACCGATTGAGCTCGAGAAAAATCCAGAGCCTACTCCTGAGGAGGTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAACGACACAAAGCTCGAGCTGGATATCCAAACCTTGAGTTGAGAATTGTTTGA 1017 0.4513 MQRAATTEDPRRRSGDAATEGEKMFKGSEEFADTSSNYLKTVLALALWLGAIHFNAALMLFAVLFLSLHQALLLFGLLFVLMVIPVDEKSKFGRKLSRYICKHVCGYFPVTLHVEDIKAFHPNRAYVFGYEPHSVLPIGVVALADSTGFMPLPKIKVLASSAVFYTPFLRHIWTWLGLTPATKKRFTSLLDAGYSCILVPGGVQETFLMEHGYEIAFLKARRGFIRIAMEKGKPLVPVFCFGQSNVYKWWKPGGKLILNFARAIKFTPIYFWGIFGSPLPFKRPMHVVVGRPIELEKNPEPTPEEVAKIHSQFVEALQDLFERHKARAGYPNLELRIV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0849 338 PANTHER TYPE 2 ACYL-COA DIACYLGLYCEROL ACYLTRANSFERASE 1 338 - -
Ssu5g0849 338 MobiDBLite consensus disorder prediction 1 22 - -
Ssu5g0849 338 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 1 338 - -
Ssu5g0849 338 CDD LPLAT_MGAT-like 107 326 - -
Ssu5g0849 338 Pfam Diacylglycerol acyltransferase 63 331 IPR007130 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0849 Ssu-Chr5 22300030 22306017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0849 27 338 Acyl Lipid Metabolism Gene Families AT3G51520 68.371 4.16e-164 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0849 K22848 - gmx:100809628 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0849 5 22300030 22306017 Ssu5g0849 5 22300030 22306017 ECH