Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0845 ATGGCATTCTGGGACCTACTCTTCGTGGCTCTGGTGCCAGTACTGGAGACGCTCTTGGTTACTCTCCTTGGTTTCCTAATTGCAACTGAACGATTTAATCTCCTGCGAAGCGTTGAATCAAGGAATTATTTGAACAATCTTGTGTTTTACATCTTCCTTCCGGCGCTCCTTGTTGCGGATTTGGCCGAAACGATTACGTTTGATCGGTTGGTTGAAATGTGGTTTATGATGGTGAATATACTCTTAACGTTCGTGGTTGGCTCCATTCTCAGTTGGGTGCTCAACAAAATCGCCAGAACCCCTAAACACCTGCGTGGCCTTGTCAATGGTTGCTGCGCTGCTGGGAATTTGGGGAATTTGCTCCTTGTCATTGTCTCAACTGTTTGTGAAGGGAGCAGTAGTGTATTTGGAGATTCATCCACCTGCTCAACTTATGGAGAAGCTTACGCGGCAGTTTCTACGGTAACTCAAATTTTTATCTGGATATATCTGTTTATCATCATGGGGGAAAGTATGGATCAGAGCACTGAAAATGTGAATACCAGTGACCCCACAGCCAGTGAAATACTTTCTGCTGGATCCCTGGAAAGATTTCCAGCAAATATCACAGAATCAATGCTTACTTCAACGGACTCTGTGAGCATTGACAACCTTTCAGTTCAACCTGAGTCACCATTTGACAGAAATGGGAGAAAAGGTTTCCCAATCTTTGTCGAGCTACAGTGGATCCAATCCTACTACTTTTGGATTATTGGATATGCCATTGGAGCAATTTCTCCAATTCGAAAGCTCATGGTTGGTGACAGTGCTCCCCTTCGTGTGATTATCACTTCTGCATCTTTAATGGGGTATGTGTTCTTCATATCTCTGGATGACTTGGATTTGCCTTTTTGCATATAA 900 0.4367 MAFWDLLFVALVPVLETLLVTLLGFLIATERFNLLRSVESRNYLNNLVFYIFLPALLVADLAETITFDRLVEMWFMMVNILLTFVVGSILSWVLNKIARTPKHLRGLVNGCCAAGNLGNLLLVIVSTVCEGSSSVFGDSSTCSTYGEAYAAVSTVTQIFIWIYLFIIMGESMDQSTENVNTSDPTASEILSAGSLERFPANITESMLTSTDSVSIDNLSVQPESPFDRNGRKGFPIFVELQWIQSYYFWIIGYAIGAISPIRKLMVGDSAPLRVIITSASLMGYVFFISLDDLDLPFCI 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0845 299 PANTHER - 1 283 IPR045033 GO:0080162
Ssu5g0845 299 PANTHER PROTEIN PIN-LIKES 3-LIKE ISOFORM X1 1 283 - -
Ssu5g0845 299 Pfam Membrane transport protein 11 186 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0845 Ssu-Chr5 22061120 22072543 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0845 K24139 - gmx:100804439 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0845 5 22061120 22072543 Ssu5g0845 5 22061120 22072543 ECH