Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0781 ATGGTTTGTGAGGACTCAGTTATCCAATTAATGATGCAGGGACTACTGAGAGTGACAAGTGAAAAGGAGGTTGAGCTGCTGGTAGATGAGTTTGAGggcttaaaattcaaattaacagaTGGTGTTGATATAGCAGATGATGGTACTATTTATTTCACAGATGCATCATACAAATACCCCGTGGAGGATGCTGTCTTAGACATATTGGAAGGCAAGCCTAATGGCAGACTCTTGAGCTATAATCCAGCAACAAAGAAGACATCCCTGCTTGCCCAAGACCTCTACTTTGCCAATGGGGTTGCAGTCTCAGCAGATCAACAATTTGTGGTCTTCTGTGAATCTGTCCTGATGAGATGCAATAAATATTACGTACAGGGCCCTAAAACAGGAAGCATAGAGAAGTTTTGTGATGTACCTGGCATGCCTGATAACATTCATTATGATGGACAAGGGCATTATTTGATTGCAATATTCTCGGCCTTTACTCCTGAAATGGATTTAGCGTTTAGATACCCTTTCATTAGGAAGGCGGTAGCAATTGTAACAAAGTATGTACGGCGTCTACTTATCTCGAAGAATGGAGGAGTTCTAGTCGTGGATTTAGAAGGAAAACCAACTGAACATTATTATGATCCCAAATTATCATTGAGTGGTGCTATTAAAATTGGGAATTATATATATGGTGGTTCCCTTTCCTACCCTTTTGTAATACGTCTTGATATTCAGAAGTATCCTGCTCTGCCCTCACTTTGA 753 0.3958 MVCEDSVIQLMMQGLLRVTSEKEVELLVDEFEGLKFKLTDGVDIADDGTIYFTDASYKYPVEDAVLDILEGKPNGRLLSYNPATKKTSLLAQDLYFANGVAVSADQQFVVFCESVLMRCNKYYVQGPKTGSIEKFCDVPGMPDNIHYDGQGHYLIAIFSAFTPEMDLAFRYPFIRKAVAIVTKYVRRLLISKNGGVLVVDLEGKPTEHYYDPKLSLSGAIKIGNYIYGGSLSYPFVIRLDIQKYPALPSL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0781 250 SUPERFAMILY Calcium-dependent phosphotriesterase 14 241 - -
Ssu5g0781 250 PANTHER STRICTOSIDINE SYNTHASE-RELATED 11 242 - -
Ssu5g0781 250 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 5-LIKE 11 242 - -
Ssu5g0781 250 Pfam Strictosidine synthase 40 126 IPR018119 GO:0009058|GO:0016844
Ssu5g0781 250 Gene3D - 6 236 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0781 Ssu-Chr5 19916757 19918542 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0781 - - gmx:100778397 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0781 5 19916757 19918542 Ssu5g0781 5 19916757 19918542 ECH