Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0779 ATGCCTTTTAACATCGTTATTTGCCATCGTTTTCGTGGTAGCGGTTCTCTACGGCTCGGCCCATTGGACCTGGCCCATGAGTTGAGTCGGCCCATTGGGTCAGAAGTTGTGGCACAGGGAGAGGTGGTGGGACCCGAAGACTTGGCTTACGATAAGAGGAGGCGTGTGATCTACACGGGTTGCGAGGATGGGTGGATCAAGCGAATCACGGTGAACGACTCGGTGGCTGACACGGTGGTCGAAAATTGGGTCAATACGGGTGGAAGACCCCTTGGACTTGCTCTTGAAAAAAGTGGTGAACTCATGGTTGCAGACGCGATTAAGGTAGGTCCCTTCCAGCTACGGGACTAA 351 0.5356 MPFNIVICHRFRGSGSLRLGPLDLAHELSRPIGSEVVAQGEVVGPEDLAYDKRRRVIYTGCEDGWIKRITVNDSVADTVVENWVNTGGRPLGLALEKSGELMVADAIKVGPFQLRD 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0779 116 PANTHER STRICTOSIDINE SYNTHASE-RELATED 33 108 - -
Ssu5g0779 116 Pfam Strictosidine synthase-like, N-terminal 34 69 - -
Ssu5g0779 116 PANTHER STRICTOSIDINE SYNTHASE-RELATED 33 108 - -
Ssu5g0779 116 Gene3D - 26 111 IPR011042 -
Ssu5g0779 116 SUPERFAMILY Calcium-dependent phosphotriesterase 31 106 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0779 - - gsj:114381080 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0779 5 19845164 19845514 Ssu5g0779 5 19845164 19845514 ECH