Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu5g0734 | atggagcATGCTTTGCATCAAAGATGGGAAGGCAAGGTTTCAGCGAAGTTAAGAAACACTACTAAAGAGCAAGCGTGGCCACTTGTAAAGGACTTCTTCAATCTCCACAAACGGTTCCCTACCCTCAACACATGCTATGGGATTCACGGATCTAACGGTGAGCCTGGCTGCATACGATATTGTGTCGGGTCCTCTATCCCATCCAACAGCTCAGAAAGCGTGAGCTGGTCAAAGGAAAGGCTGGTAGCCGTTGATGATGTTAACCTGAGCCTAAAGTATGAGATGGTGGACAGCAACATTGGGTTCAGGTCATACGAGTCAACCATCAAGGTCCTCAGCAATGATGACTCAAATGGATGCATGTTGGAATGGTCCTTCGCCGTTGACCCTATGGAAGGGTTGGTGCTTGAGGATCTGGCTAGAAAGTACGATGTGGGCCTTCAACTTATGGCCCAGAAAATGGAGGATGAAGTTGAAAGTTTGATACCCGTGCGGGTACGATACGAGTATAAGGTGAATTTTCATCCAACAAGGTAG | 537 | 0.4674 | MEHALHQRWEGKVSAKLRNTTKEQAWPLVKDFFNLHKRFPTLNTCYGIHGSNGEPGCIRYCVGSSIPSNSSESVSWSKERLVAVDDVNLSLKYEMVDSNIGFRSYESTIKVLSNDDSNGCMLEWSFAVDPMEGLVLEDLARKYDVGLQLMAQKMEDEVESLIPVRVRYEYKVNFHPTR | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu5g0734 | 178 | CDD | PYR_PYL_RCAR_like | 9 | 155 | - | - | |
| Ssu5g0734 | 178 | Gene3D | - | 3 | 163 | IPR023393 | - | |
| Ssu5g0734 | 178 | SUPERFAMILY | Bet v1-like | 19 | 157 | - | - | |
| Ssu5g0734 | 178 | PANTHER | POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER | 5 | 159 | - | - | |
| Ssu5g0734 | 178 | PANTHER | - | 5 | 159 | - | - | |
| Ssu5g0734 | 178 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 20 | 155 | IPR019587 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu5g0734 | Ssu-Chr5 | 18845749 | 18846870 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu5g0734 | - | - | ccaj:109793396 | 276.174 |
Event-related genes