Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0727 ATGGCCACAGAGACCAAAAGCAGCACTGTGAAGCTCAAATCAAGTGCCCCAGATGGCCCTTCCAAGGGAAAGATTGATTCTTCAGCTGTCAAGAAGAAACTGGACAGCTCAAGCAAGCTCCCCGCTGATTCAAAGATGAAATCTGTCTCAACTGTGACAAAATCCGAGGTTAAATCCAAATCGACATCATCGTCTTCAAAAACAATAACGAAGACAACTACAAAAGTGAGAGAGAAGAAAGTCTACAGTCTAGCTGGGCAGAAACATGATCCTCCAGAACAGAAAGAACCCCTGAGGGTTTTCTATGAATCATTGTCAAAACAGATACCAACAAGTGAAATGGCAGAATTTTGGTTAATGGAACATGGGTTGCTGTCTCCAGAAAGAGCTAAGAGAGCATTTGAGAAGAAGCAGAGGAAACAGAAGGAGCTAAGGACTGGAACCCCGGTTAAGCCATCAAAGCCGGCAACTAAAACTGAAACCTCCCAGAAGCAACAACGggcatccaaaaatggtgacaTAAAAGCCAAGAAAAGAATTGTTGAGAGtgatgatgacgatgatgatttcattttaagtcataaaagaaggaaagggTAG 600 0.385 MATETKSSTVKLKSSAPDGPSKGKIDSSAVKKKLDSSSKLPADSKMKSVSTVTKSEVKSKSTSSSSKTITKTTTKVREKKVYSLAGQKHDPPEQKEPLRVFYESLSKQIPTSEMAEFWLMEHGLLSPERAKRAFEKKQRKQKELRTGTPVKPSKPATKTETSQKQQRASKNGDIKAKKRIVESDDDDDDFILSHKRRKG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0727 199 MobiDBLite consensus disorder prediction 152 169 - -
Ssu5g0727 199 MobiDBLite consensus disorder prediction 130 147 - -
Ssu5g0727 199 MobiDBLite consensus disorder prediction 41 71 - -
Ssu5g0727 199 PANTHER OS05G0596200 PROTEIN 3 199 - -
Ssu5g0727 199 MobiDBLite consensus disorder prediction 1 15 - -
Ssu5g0727 199 MobiDBLite consensus disorder prediction 130 199 - -
Ssu5g0727 199 MobiDBLite consensus disorder prediction 25 40 - -
Ssu5g0727 199 PANTHER OS05G0596200 PROTEIN 3 199 - -
Ssu5g0727 199 MobiDBLite consensus disorder prediction 1 97 - -
Ssu5g0727 199 MobiDBLite consensus disorder prediction 170 199 - -
Ssu5g0727 199 MobiDBLite consensus disorder prediction 72 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0727 Ssu-Chr5 18483217 18488454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0727 - - gmx:100786782 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0727 5 18483217 18488454 Ssu5g0727 5 18483217 18488454 ECH