Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0722 ATGGGAGGTGGTCACTGGCTTTGTCGGTTTTTGGGTGTCATTCACACGCTACAATTCTTGTGTTCAATCACAACCGTCCATGGCATGATCCCACAGTCGCCAGTGCAATGCAACAGTTCTGGGTGCACCCTCCGCAACTCCTACGGCGCGTGGGGCGACCGCAAGGACTGCTCTGCTCTCAACGTGACATACCCCACAACCGAAGAACAGCTTCGTTTGGCAGTGTCCCATGCTGTCCAGAACAACCTCAAAGCCAAGGTCGTCACCAGATTCTCTCACACCATTCCCAAGCTGGCTTGCCCGCAAGGAAATGATGCTCGTGACGGTGCCACTGTGCTCATCAGCACAGAGAAGTATGACTCTGGCATCCAGATTGATGCTCCCAATTTGGCTGTGACTGCTGATGCGGGTGTGGGGCTTCGTCAATTGATTGACGCGGTTGAAGGTGCCGGGTTCAGCTTGGTGGCTGCGCCTTACTGGGAGGGTGTCACTGTCGCGGGGCTTATTAGCACTGGGGCACACGGTAGCTCTTGGTGGGGGAAAGGTGGTGCTGTTCATGATCATGTTCTGGGGATTAGTATTGTTGTCCCTGCTTCAAAATCTGAAGGGTATGCCAAGATTTTGAGGTTGGAGGCACAGGATCCGCTGCTTAATGCGGCCAAAGTGTCACTTGGAGTGCTGGGGGCCATCTCCAAGGTAAAGTTATCACTTGAGCATAGGTTCAAAAGAAACATAACCTTCAATTTCACAGAAGATAATCACATTGAAGATGTGTACATAGACCATGCAAAACAGTGTGAATTTGCGGATATAACTTGGTATCCGTCAAGACACACGGTTGTGTACAGATATGATTCCAGGGTTCCCTTAACTGCCTCGGGCAATGGAGTTAATGACTTCATTGGATTTCAAGCCAATCCCATCTTGATCTCCGAATCAGTTAGAGCAGCAGAGAAATTGCTAGAAAGTACAAGAAATGCAAATGGGAAATGCTTAACGGCAGCTACCACTTTGGGCTTCAAGAAACTAGTAGGCAATGGGTTGAAGAACAATGGTCAAATCTTCACTGGTTATCCGGTGTTGGGTTACCAGGGCAAAATGCAAACTTCAGGTTCATGCTTATATTCAACAAAAACTGACACCGCATGTGCTTGGGACCCGAGAATCAAAGGGCTATTCTTCTATGAGACTACAGCAATCTTCCCTGCATCCCAATTTGCAGGCTTCATCCGTGATGTGAGGCAACTGAGAGACCTCAAGCCAGAAAATTTCTGTGGGGTGGACAACTATAATGGGTTGCTATTTCGCTTCATCAAAGCCTCAAGTGCATATCTAGGACAACCTGAAGACTCTGTGGTGGTTGATTTCAACTATTATCGTGCAAACGACCCATCAAATCCTAGACTAAATCAGGATGTGTGGGAGGAAGTGGAGCAACTGGCATTTTTCAAGTATGGGGCTAAGCCACATTGGGCTAAGAACAGGAACATAGCATTCTTAGGGGTGCAGCAGAAGTATCCCAAATTTAACATGTTTATTGCAGCCAAACAAAAAATGGATCCGCAAAACGTGTTCTCTAGTAAATGGTCGGATGACATACTTTATGGGAAGGAATCGGAAAAGGTTGATGGGTGTGCTTTGGAGGGACTATGCGTATGCAGCGAAGACAGACATTGTAGCCCACAAAAGGGGTATTACTGCAGCCATGGCCTTATCTACAAGGAAGCTAGAGTCTGTAGATATTTACCACACTCCATGTCATCATCCATAGCATGA 1776 0.4747 MGGGHWLCRFLGVIHTLQFLCSITTVHGMIPQSPVQCNSSGCTLRNSYGAWGDRKDCSALNVTYPTTEEQLRLAVSHAVQNNLKAKVVTRFSHTIPKLACPQGNDARDGATVLISTEKYDSGIQIDAPNLAVTADAGVGLRQLIDAVEGAGFSLVAAPYWEGVTVAGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKILRLEAQDPLLNAAKVSLGVLGAISKVKLSLEHRFKRNITFNFTEDNHIEDVYIDHAKQCEFADITWYPSRHTVVYRYDSRVPLTASGNGVNDFIGFQANPILISESVRAAEKLLESTRNANGKCLTAATTLGFKKLVGNGLKNNGQIFTGYPVLGYQGKMQTSGSCLYSTKTDTACAWDPRIKGLFFYETTAIFPASQFAGFIRDVRQLRDLKPENFCGVDNYNGLLFRFIKASSAYLGQPEDSVVVDFNYYRANDPSNPRLNQDVWEEVEQLAFFKYGAKPHWAKNRNIAFLGVQQKYPKFNMFIAAKQKMDPQNVFSSKWSDDILYGKESEKVDGCALEGLCVCSEDRHCSPQKGYYCSHGLIYKEARVCRYLPHSMSSSIA 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0722 591 Gene3D - 396 496 - -
Ssu5g0722 591 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 31 580 IPR010030 -
Ssu5g0722 591 ProSiteProfiles PCMH-type FAD-binding domain profile. 55 240 IPR016166 GO:0071949
Ssu5g0722 591 Gene3D - 121 238 IPR016169 -
Ssu5g0722 591 PANTHER GULONOLACTONE OXIDASE 20 581 - -
Ssu5g0722 591 PANTHER L-GULONOLACTONE OXIDASE 3 20 581 - -
Ssu5g0722 591 Pfam FAD binding domain 62 197 IPR006094 GO:0050660
Ssu5g0722 591 Pfam D-arabinono-1,4-lactone oxidase 436 531 IPR007173 GO:0003885|GO:0016020
Ssu5g0722 591 SUPERFAMILY FAD-binding/transporter-associated domain-like 46 237 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0722 Ssu-Chr5 18156066 18161126 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0722 K00103 - gmx:100778616 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0722 5 18156066 18161126 Ssu5g0722 5 18156066 18161126 ECH