Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0714 ATGACTTCTCTACAATTCCTTTTACAACCGCTATCACAAACCCCCTCCAAACTGCTTGACCGCTGTCCTTCCTTTCTAGGCCATGGCCACCGCTTCCATCGGCACTGCCCCGTCATTAAACTCACTGCTCTCAGTGGTTCCGACCAACCTGGGGGCTCGGTTGATTCTAAAATTCGAGTGTCTCGTGTTCCGCTTTTGACTTCCTCGGAGGCCTATGAAAAGCTAAAAACATttagagaaaagataaaaggcAAGCAACAATTCCTTTCCATGTATTCTAGTATTTTTGGTGGGATAACAACAGACCCAGCTGCTATGGTTATTCCTATGGATGACCACATGGTCCATAGGGGCCATGGTGTCTTTGATACTGCTGCAATAATGGACGGATACCTATATGAGCTAGATCAACACCTTGATCGCTTTTTAAGTTCAGCATCCATGTCTAAAATAGCTCCCCCATTTGATCGTGAAAGCATTAGAAGAATACTCATACAAACTGTAAGTGCTTCCAAGTGTAGAAAAGGGTCACTAAGATATTGGCTCTCAGCAGGACCTGGTGATTTTCAGCTATCTCCCTCTGGCTGCCACCAATCAAGTCTTTATGCAATAGTAATACAGGATCTGTCACCATCATCGCTTAATTTGAGGGGAGTTAAAGTCATCACTTCATCTATTCCCATTAAAGACCCCCAATTTGCAATCACTAAGAGTGTGAATTATCTTCCAAATGTGCTTTCAAAGGTGGAAGCTGAAGAAGCTGGTGCTTTTGTAGGCATTTGGCTTGATGGTGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTGGCTTTTGTCACTAAAGAGAAGGAACTTATAATGCCTCACTTTGACAAAATTCTAAGCGGCTGCACAGCTAAGAGAGTTTTAACCCTTGCTGAGAGTTTGTTAAGGGAGGGTAAGCTtaagggaataaggatgaaaaaTGTGACTGTGGAGGAAGGAAAGAAAGCAGATGAAATGATGCTTCTAGGCAGTGGAGTTCTTGTTTGCCCTGTAGTGCAGTGGGATGAGCAGGTTATTGGTGATGGCAAAGAAGGCCCTATAACACAGGCTTTCTCAAATCTAATTGTTGAGGACATGAAATCAGGATCCCCTACTGTTCGTATACCTGTTCCTTATTGA 1164 0.4218 MTSLQFLLQPLSQTPSKLLDRCPSFLGHGHRFHRHCPVIKLTALSGSDQPGGSVDSKIRVSRVPLLTSSEAYEKLKTFREKIKGKQQFLSMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLSSASMSKIAPPFDRESIRRILIQTVSASKCRKGSLRYWLSAGPGDFQLSPSGCHQSSLYAIVIQDLSPSSLNLRGVKVITSSIPIKDPQFAITKSVNYLPNVLSKVEAEEAGAFVGIWLDGEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAESLLREGKLKGIRMKNVTVEEGKKADEMMLLGSGVLVCPVVQWDEQVIGDGKEGPITQAFSNLIVEDMKSGSPTVRIPVPY 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0714 387 CDD PLPDE_IV 112 370 - -
Ssu5g0714 387 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 96 374 IPR036038 GO:0003824
Ssu5g0714 387 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 63 386 - -
Ssu5g0714 387 Gene3D - 67 207 IPR043131 -
Ssu5g0714 387 Gene3D - 209 379 IPR043132 -
Ssu5g0714 387 Pfam Amino-transferase class IV 120 348 IPR001544 GO:0003824
Ssu5g0714 387 PANTHER AMINO-ACID AMINOTRANSFERASE 63 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0714 Ssu-Chr5 17611330 17614447 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0714 K18482 - gmx:100794026 647.506