Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0710 atgggGTCGAAGTGGATGGTGACGATGTCGTTGATATTACACTTTGCGTCGGTTTTGGTGTTTGTTTGGGCAGATAGAACGATTATGAAGGCGGAAGAGCCTATATTGAATAATACGCAGAGATATGAACGCAGTTTTCTTAACAAAGCTGTGAACTTCTTATGGCAACCGGGGGAGTCAGGTTATCAACACGTGTGGCCAGACATGGAATTTGGGTGGCAAATTGTTGTGGGTTCCATTATTGGATTCTTTGGAGCAGCATTTGGAAGTGTAGGTGGTGTTGGTGGGGGTGGCATATTCGTTCCTATGCTCAGCCTTGTTGTTGGCTTTGATGCGAAATCGTCCACAGCTATCTCGAAATGTATGATCATGGGTGCAGCTTTGTCAACTGTTTACTATAATCTTAATCTAAGGCATCCCACATTGGATCTGCCCATCATCGACTATGATTTGGCACTGCTCATTCAACCAATGCTCATGCTTGGCATTAGCATTGGAGTGGTCTTCAATGTCGTAGTTGCTGATTGGATGGTCACTATGCTACTTCTTGTTCTGTTTTTAGGAACGTCCACAAAAGCATTCTTTAAGGGTGTTGAAATTTGGAAAAAGGAAACCATAATGAAAGAGTGTTTACAGACAGTTCTCCCTTTAATAGGTGTTGCGACTGAAGTAGAATACAGACCAATTCCTAGTGGACCTGACAACGACATTGCAAAGGACACAAAAAAAGATGAGGTGACTATGCTTGAAAATGTGTATTGGAAGGAGTTTGGacttcttgtttttgtttgggtTGCATTCCTTGCAATACAGATTGCCatgACCCAGACAACCAAATGTTCAACAACATATTGGATACTGAACATGTTGCAGATTCCAATTTCAGTTGGGGTGTCTGGATATGAGGCAGTTTCCTTGTTTAAGGGACGGAGAGTAATTTCTTCAGTGGGAGATCAAGGGAAAAGCTTTAATGTTCAGCAGCTAACGACCTATTGTATCTTCGGATTACTGGCTGGAATAGTTGGTGGCTTGCTAGGAATAGGAGGAGGATTCGTTATGGGGCCACTCTTTTTGGgtcataaaatatCCACTTTTGCCATGGTCTTCTCCTCATCTATGTCTGTTGTAGAATACTACCTGCTCAAACGTTTTCCAGTTCCTTATGCTCTATACTTTATTGTGGTGGCTGCTATTTCGGCCATTATAGGGCAGCATATTGTGAGAAAGCTAATCAATTTACTTGGCAGAGCATCTCTTATCATCTTTGTTCTAGCCTTCACAATATTTGTCAGTGCCGTCTCACTAGGGGCCAAGCCCCATGAATTACGCTGGGCCCAAACCCTTTTCACTGTTGCAGAAGGAGTCTGGAAGCTTATGAGGAACAGAGGTCGCATAGGGGTATGGATTGATCTTCATGGAGGCGGTAGCATCGGGACCTGGAGCACGACAGTGGCAGGCACGACGGTGATTGACGAGACCACCGTTTTGGGCCACGGACTCACGGTGTTGACACGTCACTCTCCGAGGGCGGCGTGGTAG 1539 0.4373 MGSKWMVTMSLILHFASVLVFVWADRTIMKAEEPILNNTQRYERSFLNKAVNFLWQPGESGYQHVWPDMEFGWQIVVGSIIGFFGAAFGSVGGVGGGGIFVPMLSLVVGFDAKSSTAISKCMIMGAALSTVYYNLNLRHPTLDLPIIDYDLALLIQPMLMLGISIGVVFNVVVADWMVTMLLLVLFLGTSTKAFFKGVEIWKKETIMKECLQTVLPLIGVATEVEYRPIPSGPDNDIAKDTKKDEVTMLENVYWKEFGLLVFVWVAFLAIQIAMTQTTKCSTTYWILNMLQIPISVGVSGYEAVSLFKGRRVISSVGDQGKSFNVQQLTTYCIFGLLAGIVGGLLGIGGGFVMGPLFLGHKISTFAMVFSSSMSVVEYYLLKRFPVPYALYFIVVAAISAIIGQHIVRKLINLLGRASLIIFVLAFTIFVSAVSLGAKPHELRWAQTLFTVAEGVWKLMRNRGRIGVWIDLHGGGSIGTWSTTVAGTTVIDETTVLGHGLTVLTRHSPRAAW 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0710 512 Pfam Sulfite exporter TauE/SafE 332 482 IPR002781 GO:0016021
Ssu5g0710 512 Pfam Sulfite exporter TauE/SafE 68 189 IPR002781 GO:0016021
Ssu5g0710 512 PANTHER CEREBLON 10 437 - -
Ssu5g0710 512 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 10 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0710 Ssu-Chr5 17427506 17445969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0710 - - gmx:100807603 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0710 5 17427506 17445969 Ssu5g0710 5 17427506 17445969 ECH