Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0704 ATGCTCAGGCTGTGGAAATGGTACCAGAATTGCTTGGCTGTTCACCCTGTTAAGACACAGGTCATCAGCTCTGGCTTGATTTGGGGTGCTGGTGACATAGCTGCTCAGGCAGTCACCCACTACACTGCCAAGACCCATGCCACAATGGATGAGGGTGACAATAAAGAATTCAAGATCAACTGGAAACGGGTGTCTACGACCAGCTTGTTTGGGTTAGGATTTGTTGGCCCTGTCGGCCACTACTGGTATGAAGGTTTGGATCGGTTTATAAGATTGAGACTTATGCTTAAACCGAATTCCTTCCGCTTTGTTGCCACTAAAGTTGGCCTTGATGGGTTTCTCTTTGGGCCATTGGATTTAGTTGTGTTTTTTACCTACATGGGTTTTTCTACTGGAAAGAGTGTTCCTCAAATAAAAGAAGATGTGAAGAGAGATTTTCTCCCAGCCTTTGTTTTAGAAGGAGGCATATGGCCAATTGTTCAGGTCGCGAATTTTCGGTTTATACCTGTAAGGTATCAGCTCCTTTATGTCAACTTCTTCTGTTTGTTGGATAGCTGTTTCTTGTCTTGGGTTGAGCAACAACAGGATGCTCCATGGAAACAATGGTTGAAATCATTTCTACCTTTGAAGTAA 633 0.4376 MLRLWKWYQNCLAVHPVKTQVISSGLIWGAGDIAAQAVTHYTAKTHATMDEGDNKEFKINWKRVSTTSLFGLGFVGPVGHYWYEGLDRFIRLRLMLKPNSFRFVATKVGLDGFLFGPLDLVVFFTYMGFSTGKSVPQIKEDVKRDFLPAFVLEGGIWPIVQVANFRFIPVRYQLLYVNFFCLLDSCFLSWVEQQQDAPWKQWLKSFLPLK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0704 210 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 1 209 IPR007248 GO:0016021
Ssu5g0704 210 Pfam Mpv17 / PMP22 family 129 189 IPR007248 GO:0016021
Ssu5g0704 210 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0704 Ssu-Chr5 17285497 17288726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0704 7 195 Miscellaneous Gene Families AT2G14860 24.868 5.87e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0704 K13348 - gmx:100805283 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0704 5 17285497 17288726 Ssu5g0704 5 17285497 17288726 ECH