Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0701 ATGGAGTTTCCTCTCCTATGCATGTTTGCTTTACTCAATCTAGCACTGGTGGTAACCCATGCAGCCTTACCCCCTGAAGTTTACTGGAAGTCCAAGCTTCCCACTACTCCAATGCCAAAAGCCATTGCAGATATCCTGCACCCTGAATGGGTAGAAGGCAAAAGCACCTCTGTGGCTGTAGGGAAGGGTGGCGTAAACGTTGATGCAGGGAAAACAAAGCCTGGAGGCACTTCAGTCAACGTAGGAAAAGGAGGAGTGAATGTAAACACAGGACCAAAGGGAAAGCCAGTACATGTTGGAGTGGGGCCACATTCTCCATTTGATTACAATTATGCAGCCAGCGAGACCCAATTACATGATGACCCCAGTGTGGCACTCTTCTTCTTGGAAAAGGACTTGCATCATGGAACAAAACTGGACTTGCACTTCACTAACCCCTCAAATATTGAGGCCACATTCTTGCCTCGCCCATTGGCTGATTCCATACCCTTTTCATCAAACAAGGTCAATGAGATGCTGGACAAGTTCTCCATCAAGCCAGGGTCAGACGAGGCTCAAATTGTGAAGAACACCATCAGTGAGTGTGAAGAGCCTAGCATTAGAGGAGAGGAAAAGCGTTGTGTGACTTCGCTTGAGTCCATGGTTGATTTCGCCACTTCCAAGCTTGGGAACAATGTTGATGCTGTTTCCACAGAGGTGGAAAAAGAGAGTGAGTTGCAACAATACACAATAGCACCAGGGGTTAAGAAGTTGGGTGAGAACAAGGCTGTTGTGTGCCACAAGCAGAAATACCCATATGCAGTGTTTTATTGTCACAAATCAGATACCACTAGAGCCTATTCTGTCCCATTGGAGGGTGCTGACGGAAGCAGGGTCAAAGCAGTTGCAGTGTGTCACACTGACACATCACACTGGAATCCCAAGCATTTGGCCTTCCAAGTACTTAAAGTTCAACCAGGAACTCTTCCTGTCTGCCACTTCCTCCCTCAGGATCATGTTGTCTTTGTTCCCAAATAA 1017 0.471 MEFPLLCMFALLNLALVVTHAALPPEVYWKSKLPTTPMPKAIADILHPEWVEGKSTSVAVGKGGVNVDAGKTKPGGTSVNVGKGGVNVNTGPKGKPVHVGVGPHSPFDYNYAASETQLHDDPSVALFFLEKDLHHGTKLDLHFTNPSNIEATFLPRPLADSIPFSSNKVNEMLDKFSIKPGSDEAQIVKNTISECEEPSIRGEEKRCVTSLESMVDFATSKLGNNVDAVSTEVEKESELQQYTIAPGVKKLGENKAVVCHKQKYPYAVFYCHKSDTTRAYSVPLEGADGSRVKAVAVCHTDTSHWNPKHLAFQVLKVQPGTLPVCHFLPQDHVVFVPK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0701 338 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 7 53 - -
Ssu5g0701 338 MobiDBLite consensus disorder prediction 69 94 - -
Ssu5g0701 338 SMART BURP_2 125 338 IPR004873 -
Ssu5g0701 338 Pfam BURP domain 126 337 IPR004873 -
Ssu5g0701 338 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 7 53 IPR044816 -
Ssu5g0701 338 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 64 337 - -
Ssu5g0701 338 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 64 337 IPR044816 -
Ssu5g0701 338 ProSiteProfiles BURP domain profile. 127 338 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0701 Ssu-Chr5 17026888 17029218 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0701 - - gmx:100170724 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0701 5 17026888 17029218 Ssu5g0701 5 17026888 17029218 ECH