Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0700 ATGGAGTTTCACATTCTTCCCATCATTACTTTTCTTATGGTTGTTGTGGCAACTAATGCTGCATTACCTCCTGAATTTTACTGGAAGTCCATGCTTCCCACCACACCAATGCCGAAAGCCATCACTGATTTGCTACACGCTGATTGGAGGGAAGAGAAAGACACCTCTGTAGGTGTAGGGAACGATGGTGTAAATGTTGGTGTAGAAAAGGGAAACCAAGGAGGTGGTACTGATGTTAATGTTGGTGGAGGAAACGGTGGAGTGAATGTAAACACAGGACCAAAGGGAAAGCCAGTACATGTTGGAGTGGGGCCACATTCTCCATTTGATTACAATTATGCAGCCAGCGAGACCCAATTACATGATGACCCCAATGTGGCACTCTTCTTCTTGGAAAAGGACTTGCATCATGGAACAAAACTGGACTTGCACTTCACTAACTCCTCAAATATTGAGGCCACATTCTTGCCTCGTCCATTGGCTGATTCCATACCCTTTTCATCAAACAAGGTCAATGACATACTGGACAAGTTCTCCATCAAGCCAGGGTCAGACGAGGCTCAAATTGTGAAGAACACCATCAGTGAGTGTGAAGAGCCTAGCATTAGAGGAGAGGAAAAGCGTTGTGTGACTTCACTTGAGTCCATGGTTGATTTCGCCACTTCCAAGCTTGGGAACCATGTTGATGCTGTTTCCACAGAAGTGAGAAAAGAGAGTGAGTTGCAACAATACACAATAGCACCAGGGGTTAAGAAGTTGGGTGAGGACAAGGCTGTTGTGTGCCACAAGCAGAAATACCCATATGCTGTGTTTTATTGTCACAAATCAGATACCACTAGAGCCTATTCTGTCCCATTGGAGGGTGCTGATGGAAGCAGGGTCAAAGCAGTTGCAGTGTGTCACACTGACACATCGCATTGGAATCCCAAGCATTTGGCCTTCCAAGTGCTTAAAGTTCAACCAGGAACTGTACCTGTTTGCCACTTCCTCCCTCAGGACCATGTTGTCTTTCTTCCCAAGTAG 1023 0.4575 MEFHILPIITFLMVVVATNAALPPEFYWKSMLPTTPMPKAITDLLHADWREEKDTSVGVGNDGVNVGVEKGNQGGGTDVNVGGGNGGVNVNTGPKGKPVHVGVGPHSPFDYNYAASETQLHDDPNVALFFLEKDLHHGTKLDLHFTNSSNIEATFLPRPLADSIPFSSNKVNDILDKFSIKPGSDEAQIVKNTISECEEPSIRGEEKRCVTSLESMVDFATSKLGNHVDAVSTEVRKESELQQYTIAPGVKKLGEDKAVVCHKQKYPYAVFYCHKSDTTRAYSVPLEGADGSRVKAVAVCHTDTSHWNPKHLAFQVLKVQPGTVPVCHFLPQDHVVFLPK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0700 340 Pfam BURP domain 128 338 IPR004873 -
Ssu5g0700 340 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 9 57 - -
Ssu5g0700 340 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 75 339 - -
Ssu5g0700 340 ProSiteProfiles BURP domain profile. 129 340 IPR004873 -
Ssu5g0700 340 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 9 57 IPR044816 -
Ssu5g0700 340 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 75 339 IPR044816 -
Ssu5g0700 340 SMART BURP_2 127 340 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0700 Ssu-Chr5 16957231 16959871 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0700 - - gmx:100272209 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0700 5 16957231 16959871 Ssu5g0700 5 16957231 16959871 ECH