Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0693 ATGGGGTGGGGAAATATTTACAGAAGACGTGTTAGAGTATTTACAATGGCCTTAATAGTATACCTAGATTATAAGGGTGTACAACAACGAGAGAAATGGACTAACAAATCAAGACAAGCTGCATTGTGGGAGAAGGCCCATGAGCGTAACGCTAAGCGTGTTCTAAATTTGATAATAGAGATGGAAGGCTTATGGGTTAAACTTGGGCAATATATGTCAACACGTGCAGATGTGCTTCCTGCTGCTTATATACGTCTTTTGAAGCAGTTACAGGACTCTCTTCCTCCTCGACCTTTGGAAGAGGTCTATAGCACCATACAGAAAGAGTTGGGGAAATCAATGGATGAGCTATTTGCTGATTTTGTCAACGAACCTTTGGCAACTGCATCAATAGCACAAGTCCACCGTGCAACTCTGCTCAATGGACAGGAAGTGGTAGTTAAAGTTCAACATGATGGTGTCAAGACAGTTATACTGGAGGACTTAAAAAATGCGAAGTCAATTGTTGACTGGATTGCATGGGCTGAGCCACAATATAACTTTAATCCTATGATTGATGAATGGTGCAAAGAAGCTCCTAAGGAACTTGACTTCAATCATGAAGCTGAAAACACTAGAACGGTGGCTAAAAACCTTGGCTGCAGAAACCAAtatgatgaaaatatgaatGCCAATAGAGTGGACGTTTTGATCCCAGATGTAATTCAGTCTACAGAAAAAGTCCTTGTTTTGGAGTACATGGATGGCATTCGGTTGAATGATTTAGAATCACTAGAAGCTTTTGGagtaaataaacaaaagattGTTGAGGAGATAACTCGTGCCTATGCCCACCAGATATATGTTGATGGGTTTTTCAATGGTGATCCTCATCCggGAAATTTTCTTGTGAGCAAGGAATCTCCACATCGTCCCATTTTACTTGACTTTGGGCTTACGAAGGAACTATCAAGTACCATTAAGCAAGCACTTGCAAAGATGTTTTTGGCATCTGCTGAGGGGGACCACGTGGCCCTTCTGTCTGCCTTTGCAGAAATGGGGCTTAAGTTGCGTCTGGACATACCAGAGCAGGCAATGGAAGTAACAACTGTATTCTTTCGTGCGACAACACCGGCAAATGAATACCATAAAACGATGAAATCTCTAGCCGATCAAAGAGTCAAAAATATGAAGGTTATACAGGAGAAAATGAACCTTgaccaaaaagaaatgaaacgCTTTAATCCTgtGGATGCATTTCCTGGTGATATTGTAATATTTGGAAGGGTTCTTAATCTTCTAAGAGGGCTTTCTTCCACCATGAATGTACAAATAGTATATATGGACATTATGAGGCCATTTGCAGAATCAGCTTTGAGTGGGTACATTAGTAGAGGACCATCAGTAAATGATAGATGGATTTTTGATTCACCAGTCCATTCTGATGTAGAAGCCAAGCTGAGGCAGCTTTTAATTGAGATGggaaataatgataaaatactTGGAATCCAGGTATGTGCCTACAAAGATGGAGAGGTCATTATTGACACTGCTGCAGGAGTGCTTGGTAAATATGATCCCCGTCCGGTTAAGCCTGATAGCCTTTTTCCTGTATTCTCTGTTACAAAGGGTATCACAGCAGGAATGATACATTGGCTGGTTGACAATGGACAACTAAACCTTGAAGAGAATGTTGCAAATATTTGGCCAGCATTTGCATCAAATGGGAAGGATGTCATTAAGGTTCATCATGTGCTTAACCATACATCTGGTTTGCACAATGCAACGGCAGACATGGCTCAAGAAAACCCTCTTCTGATGTTGGATTGGGATGAATGTTTAAATCGCATCTGTATGTCGGTACCTGAGTCTGAACCAGGCAAAGAGcagttttatcattatttatcatTTGGCTGGTTGTGTGGTGGAATCATTGAGCATGCATCTGGCAAGAAGTTTCAGGAGATCCTTGAAGAAGCAATAGTTCGTCCCCTCCATCTTGAAGGAGAAATGTATATAGGGATTCCCCCAGGGGTGGAATCACGTCTTGCAGCTCTGACCGTAGATACAGATGACTTAAGCAAGTTCTCAACAATCACTAATCGTCCTGAACTTCCCTCCACCTTCCAGCCGCAGCAAATTGCTCAACTTGCAACCACTTTACCTGTTGTTTTCAATACACTGAATGTTCGTCGAGCGATCATACCAGCTGCTAATGGACATTTATCTGCTCGGGCACTTGCACGTTATTATGCAGCCCTAGCTGATGGTGGCAAGATACCACCACCTCATTCTTCTGCTTCTAAGCCAGTACTTGGAAGTCATCCCCACATCCCTAAATTATCTTCACAGAAACCCCCCAAAAGCGAAAATGTATTGGACGGAAGCAAGCAACTTTGCCTAGTACTACTAAAAGTTATGAAAAAGTTTCTAGTTATGAAGATTTTGAGGTTAATGAGGGCAGAAATACTGACAGAGAGAGTAGCAGTAGTGATGATCCTAGCAGTAGTAAAATTGGTAATAATCTGA 2508 0.4051 MGWGNIYRRRVRVFTMALIVYLDYKGVQQREKWTNKSRQAALWEKAHERNAKRVLNLIIEMEGLWVKLGQYMSTRADVLPAAYIRLLKQLQDSLPPRPLEEVYSTIQKELGKSMDELFADFVNEPLATASIAQVHRATLLNGQEVVVKVQHDGVKTVILEDLKNAKSIVDWIAWAEPQYNFNPMIDEWCKEAPKELDFNHEAENTRTVAKNLGCRNQYDENMNANRVDVLIPDVIQSTEKVLVLEYMDGIRLNDLESLEAFGVNKQKIVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKESPHRPILLDFGLTKELSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLRLDIPEQAMEVTTVFFRATTPANEYHKTMKSLADQRVKNMKVIQEKMNLDQKEMKRFNPVDAFPGDIVIFGRVLNLLRGLSSTMNVQIVYMDIMRPFAESALSGYISRGPSVNDRWIFDSPVHSDVEAKLRQLLIEMGNNDKILGIQVCAYKDGEVIIDTAAGVLGKYDPRPVKPDSLFPVFSVTKGITAGMIHWLVDNGQLNLEENVANIWPAFASNGKDVIKVHHVLNHTSGLHNATADMAQENPLLMLDWDECLNRICMSVPESEPGKEQFYHYLSFGWLCGGIIEHASGKKFQEILEEAIVRPLHLEGEMYIGIPPGVESRLAALTVDTDDLSKFSTITNRPELPSTFQPQQIAQLATTLPVVFNTLNVRRAIIPAANGHLSARALARYYAALADGGKIPPPHSSASKPVLGSHPHIPKLSSQKPPKSENVLDGSKQLCLVLLKVMKKFLVMKILRLMRAEILTERVAVVMILAVVKLVII 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0693 835 SUPERFAMILY Protein kinase-like (PK-like) 91 313 IPR011009 -
Ssu5g0693 835 Pfam Beta-lactamase 483 758 IPR001466 -
Ssu5g0693 835 Gene3D - 475 787 IPR012338 -
Ssu5g0693 835 CDD ABC1_ADCK3-like 89 343 - -
Ssu5g0693 835 PANTHER ABC1 FAMILY PROTEIN 1 788 - -
Ssu5g0693 835 PANTHER ABC1 FAMILY PROTEIN 1 788 - -
Ssu5g0693 835 SUPERFAMILY beta-lactamase/transpeptidase-like 474 757 IPR012338 -
Ssu5g0693 835 MobiDBLite consensus disorder prediction 757 785 - -
Ssu5g0693 835 Pfam ABC1 atypical kinase-like domain 89 339 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0693 Ssu-Chr5 16594557 16605979 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0693 K08869 - gmx:100802638 1476.84