Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0684 ATGGTAATGACCCATTTAACTGAATTTTCCAATTTCTTGAACTCGTTTGCCACATCTAGCCCGTCCCCTAGTCGAGTTCGAGCCACCGAATGCCAATGCTCCAACTTGCAAAAGCGGCTTGAGTTTAGCCGCGAGAAGGCACGAGCCAAGCTCCAATTAGTTGCTAGGTTAAAATGTGGCTCAGCTTGTCTATTTGCAATAATCACAGCTTCACTTGTTATGATTGTTATGACTCATGGCTTTGCATTGCTTGTGGCTACGCCGGGATTGGCTTTCATGAATTTGGCTTCAAAAAGGAAGCTAGCTAAGGTGATGGCTCAACTCGATGCAGCTGCAAAAGGAACTTATATATTGAATAAGGACTTGGAGATAACGAGTCGACTTGTGGCTCGACTAAATGACGAATTGGAGTACATGAGGACAACAGTGAGGTTTTGGCTTGAGAGGAAAGAGGAAAGAATTCAAGTTGACAGTGAAGTGGTGCGCTTGTTAAAGAATAACCAATGCAATTTTAGTGATCAATTGGATGAGTTGGAAGAACATTTGTATTTGTGTTTCATGACTATTAATAGGGCTAGAGACCTTGTGCTAAACCAGATCACTAACTCAACTTGA 615 0.4228 MVMTHLTEFSNFLNSFATSSPSPSRVRATECQCSNLQKRLEFSREKARAKLQLVARLKCGSACLFAIITASLVMIVMTHGFALLVATPGLAFMNLASKRKLAKVMAQLDAAAKGTYILNKDLEITSRLVARLNDELEYMRTTVRFWLERKEERIQVDSEVVRLLKNNQCNFSDQLDELEEHLYLCFMTINRARDLVLNQITNST 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0684 204 Pfam Protein of unknown function (DUF677) 65 200 IPR007749 -
Ssu5g0684 204 PANTHER UPF0496 PROTEIN 3 2 202 - -
Ssu5g0684 204 Coils Coil 26 46 - -
Ssu5g0684 204 PANTHER UPF0496 PROTEIN 3-RELATED 2 202 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0684 Ssu-Chr5 16318216 16318830 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0684 - - gmx:100785927 327.791