Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0683 ATGAGGATCGAGCAAGAGAGTGATGGAGTCTCCGCTTCCACGAAGCACCTCGTCTTTGCGTATTACGTCACTGGTCATGGTTTTGGCCATGCCACTCGAGTCACTgagGTTGTGCGGCATTTGATTCATGCGGGGCATGATGTGCATGTGGTCACTGGTGCTCCTGATTTCGTTTTCACCTCTGAAATTCAGTCTCCTCGCTTATTCATTCGCAAaGTGCTTTTGGACTGTGGAGCTGTTCAGGCAGATGCTTTGACTGTTGATCGCCTTGCCTCTTTGGCGAAGTATTCTGAAACAGCAGTGAAGCCCCGTGCTCAAATCTTGGCTCAAGAAACTGAGTGGCTGAACTCTGTCAAAGCTGACTTAGTGGTCTCTGATGTTGTCCCCGTTGCATGTCAAGCAGCAGCAGATGCCGGCATTCGCTCTGTTTGTGTGACCAATTTCAGTTGGGACTTTATCTATGCAGAGTATGTCATGGCTGCTGGACTTCATTATCGTTCAATAGTTTGGCAGATAGCTGAGGACTATTCCCATTGCGAGTTCCTTATCCGCCTCCCTGGATATTGTCCAATGCCTGCTTTTCGTGATGTTATTGACGTCCCTTTGGTAGTGAGGAGGTTGCATAAATCTGCAAAAGAGGTGAGGAAGGAACTTGGGGTACCTGATGATGTGAAGCTAGTTATTCTTAACTTTGGTGGGCAGCCATCAGGATTGAAGCTAAAGGAGGAATTCTTACCGTCTGGCTGGTTGTGCCTGGTTTGTGGTGCTTCTGAGCATGAGGACCTTCCGCCTAACTTTATAAAACTTGCTAGAGATGCATATACACCTGACATTATTGCAGTGTCTGACTGTATGCTTGgaaaaattgGATATGGCACTGTTAGCGAGGCCTTGGCATACAAGTGTCCTTTTGTCTTTGTACGTAGAGATTATTTCAATGAAGAACCTTTTTTGAGAAATATGCTTGAGtattaTCAATGTGGTGTTGAAATGATTAGGAGGGATTTACTGACTGGTCACTGGAGACCTTATCTTGAACGTGCAATAAGTTTGAAACCCTGCTATGAAGCAGGCATTAATGGTGGTGAGGTGGCAGCCCACATCCTGCAGGAAACGgcttttggaaaaaattatgcATCAGATAAGCTTAGTGGGGCAAGAAGATTGCGTGATGCCATAGTTCTTGGGTATCAACTGCAACGGGCCCCTGGCCGAGATATTACAATCCCAGAATGGTATGCAACTGCTGAAAACCAACTTGGCCACTCAACACCTGGTTCCCCTGTGGATGATGGAAGGACATTGAAAACTTTGACATTCTTCATGGAGATGTTCAAGGACTTCCAGATACTGTGGCATTCTTACAGAACCTATCTGAATTACAGGAGAAGCACACAAGGCGAGGAGCGCAAGGCTGCAGCTAATCTCTTCAACTGGGAGGAAGAAATTTTTGTGACGAGAGCTCCTGGAAGGTTAGACGTAATGGGTGGTATTGCTGACTATTCTGGAAGTCTAGTTCTGCAGATGCCAATTAAAGAAGCCTGCCATGTTGCTTTGCAAAGAATCCATCCAAGTAAACATAGGCTGTGGAAACATGCTGAGGCTCGACAGAATGACAAAGGGGGAAATCCTACTGCTGTCTTGCAAATTGTATCATATGGCTCAGAATTGAGCAATCGTGGCCCAACATTTGACATGGATTTGTCTGATTTTATGGATGAAGACAAGCCAATCTCATATGAGAAAGCAAAGAAATACTTTGCTCGAGATCCTTCCCAAAAGTGGGCAGCATATGTTGCAGGGGTAATTTTGGTCTTAATGACTGAATTGGGTGTGCAATTTGAAGATAGTATCAGCATGCTGGTTTCATCTGCAGTCCCAGAAGGGAAAGGCGTATCATCTTCTGCATCTGTGGAGGTTGCTAGTATGTCTGCTATTGCAGCTGCTCATGGATTAAATATCAGCCCAAGGGATCTGGCCATACTCTGCCAGAAGGTGGAAAATCACATTGTAGGAGCACCATGCGGTGTCATGGACCAGATGGCTTCAGCATGTGGTGAAGCCAACAAACTTCTTGCTATGATTTGCCAGCCTGCAGAGATTGTTGGCCTTGTCGAAATTCCCAGCCATATCCGTGTCTGGGGAATTGATTCTGGAATAAGACACAGTGTTGGAGGTGCAGACTATGGTTCTGTCAGAATTGGCACGTTTATGGGTATGAAGATGATAAAGGCCAAGGCTGTGGAATTGTCTGAGAAGTGTGCTGCCAATGGGTTGAACTATGATGAAGTGGAACAAGACGATATAGAACTACTTAAACAAGAAGTCTTCTTAGATTACTTATGTAATTTGTCACCTCACAGATTCGAGGCTCTTTATTCTAAGACAATTCCTGAGTCCATTGCTGGTGAGACATTTTTGGAGGAATATGAAAATCATAATGATCCTGTCACTGTTATTGATCAGAAGTGTTCTTACGGAGTTAGAGCTCCCACAACGCATCCTATCTATGAAAATTTCCGAGTCAAGACCTTCAAAGCACTTCTAACATCGGCACCTTCAACCGAACAACTTACGGCCTTAGGAGAATTGCTATATCAGTGCCACTACAGCTACAGTGCTTGTGGACTTGGCTCTGATGGAACAAATAGGCTTGTACACTTGGTACAAGAGTTGCAGCACAGTGCAGCATCTAAATCTGAAGGTGGGACATTATTTGGAGTCAAGATAACTGGTGGTGGTTCAGGTGGAACAGTTTGTGTAATTGGCAGAAACTGTCTCAAGAGCAGTGAACACATTTTTGagGTTCAGCAGAGGTACAAGAAAGCTACTGGTTATTTGCCCTTTATTTTTGAGGGTTCATCACCAGGTGCTGGAAAATTTGGGTACCTGAAAATACGCCGTCGAGTTACCCTGAAAAAGGTTGACACCGATGGAGACGATGATGGTGCAGTCACGGTGGAGAATAACAGTTGA 2976 0.4452 MRIEQESDGVSASTKHLVFAYYVTGHGFGHATRVTEVVRHLIHAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLAKYSETAVKPRAQILAQETEWLNSVKADLVVSDVVPVACQAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHYRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSAKEVRKELGVPDDVKLVILNFGGQPSGLKLKEEFLPSGWLCLVCGASEHEDLPPNFIKLARDAYTPDIIAVSDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEYYQCGVEMIRRDLLTGHWRPYLERAISLKPCYEAGINGGEVAAHILQETAFGKNYASDKLSGARRLRDAIVLGYQLQRAPGRDITIPEWYATAENQLGHSTPGSPVDDGRTLKTLTFFMEMFKDFQILWHSYRTYLNYRRSTQGEERKAAANLFNWEEEIFVTRAPGRLDVMGGIADYSGSLVLQMPIKEACHVALQRIHPSKHRLWKHAEARQNDKGGNPTAVLQIVSYGSELSNRGPTFDMDLSDFMDEDKPISYEKAKKYFARDPSQKWAAYVAGVILVLMTELGVQFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNISPRDLAILCQKVENHIVGAPCGVMDQMASACGEANKLLAMICQPAEIVGLVEIPSHIRVWGIDSGIRHSVGGADYGSVRIGTFMGMKMIKAKAVELSEKCAANGLNYDEVEQDDIELLKQEVFLDYLCNLSPHRFEALYSKTIPESIAGETFLEEYENHNDPVTVIDQKCSYGVRAPTTHPIYENFRVKTFKALLTSAPSTEQLTALGELLYQCHYSYSACGLGSDGTNRLVHLVQELQHSAASKSEGGTLFGVKITGGGSGGTVCVIGRNCLKSSEHIFEVQQRYKKATGYLPFIFEGSSPGAGKFGYLKIRRRVTLKKVDTDGDDDGAVTVENNS 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0683 991 Pfam GHMP kinases N terminal domain 621 686 IPR006204 GO:0005524
Ssu5g0683 991 SUPERFAMILY Ribosomal protein S5 domain 2-like 477 700 IPR020568 -
Ssu5g0683 991 SUPERFAMILY GHMP Kinase, C-terminal domain 712 960 IPR036554 -
Ssu5g0683 991 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 331 - -
Ssu5g0683 991 PIRSF Gal_kin_glcsltr 1 972 IPR012369 -
Ssu5g0683 991 Gene3D - 822 945 IPR036554 -
Ssu5g0683 991 Pfam Glycosyl transferase family 1 21 147 - -
Ssu5g0683 991 PANTHER L-ARABINOKINASE 17 967 - -
Ssu5g0683 991 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 967 - -
Ssu5g0683 991 Pfam GHMP kinases C terminal 856 931 IPR013750 -
Ssu5g0683 991 Gene3D Glycogen Phosphorylase B; 13 167 - -
Ssu5g0683 991 Gene3D - 464 713 IPR014721 -
Ssu5g0683 991 Pfam Galactokinase galactose-binding signature 477 520 IPR019539 -
Ssu5g0683 991 Gene3D Glycogen Phosphorylase B; 207 350 - -
Ssu5g0683 991 PRINTS Mevalonate kinase family signature 488 512 - -
Ssu5g0683 991 PRINTS Mevalonate kinase family signature 624 646 - -
Ssu5g0683 991 PRINTS Mevalonate kinase family signature 667 686 - -
Ssu5g0683 991 PRINTS Mevalonate kinase family signature 907 924 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0683 K12446 - gmx:100787860 1730.69