Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0682 ATGGGCTCCTCCGCTGCTACGAACGAGAAGCTCTTAGAAAATggcacttcttcttcttcttctcgtCAATCCAGAAAGGGTGGCTTGCGAACCATGCCCTTCATCATAGTGAACGAGTGTCTGGAGAAGGTGGCGAGCTACGGGATCATACCGAACATGATACTGTACCTGAGGAACGATTACGGCATGCCTATTGCCAAGGGCACCAACGTAATTTACACCTGGTCTGCAGTGTCCAACATCTTGTCCATCTTCGGGGCCTTCCTCTCCGATTCTTACTTGGGTCGATTCCTCGTCGTTTGCATCGGTTCCTTCTCCAGCCTTCTTGGTTTAACCATTTTGTGGTTAACTGCCATGATCCCAGAGCTAAGACCTTCCTGTGAATCACTCATGCTAGTCTGCAACTCTGCTACCGCAGCTCAACTAGCAGTTTTGTTCCTTTCCTTGGGATTAATTTCCATTGGAGCTGGTTGTGTCAGACCTTGCTCCATAGCATTTGGAGCAGATCAACTGACAATTAAAGAAAGATCCAATGATGAGAGGCTCTTGGATAGCTACTTTAATTGGTATTATACCTCAGTTGGAGCATCAACCGCGATTGCTTTGAGTGTAATTGTGTACATTCAAGAAAATCTGGGATGGAAAATTGGGTTTGGAGTACCTGCTGTGCTAATGTTCATATCGGCTGTCAGTTTCATCCTTGGTTCACCCTTCTATGCCAAAGTGAAGCCAGGTCACAGCTTACTCACCAGTTTTGTACAAGTAGTTGTGGTGGCCGTAAAGAACAGAAAACGTAATCTTCTTGATTGCAACTTTGATCAGTATTATCAAGACCATGATTCAGAGCTGATGGTCCCTACTGATAGCCTTAGGTGTTTGAACAAAGCTTGCATAATAAGAAATCCTGAGACAGTCTCAAACCCTGATGGATCAGTTTCAGATCCATGGAGCCAATGCACAGTAGGACAGGTGGAGTCAGTGAAATCTTTGCTCAGAGTCCTTCCAATGTGGTCGACAGGCATCTTTATGATGGTGTCTCTAAGCACGTTCTCTACCCTCCAAGCAAATACCATGGATCGAAGGTTATTTGGCAATTTCAAGATGCCTGCAGGATCCTTCACTCTTATCATGATAATCACCTTATCAATAATCATCCCCGTGTATGACCGCATAATGGTACCTCTACTAGCAAAATACACTGGCTTGCCTAGAGGATTCAGTTGCAAATCTCGAATTGGGACAGGATTGTTGTTTGTATGTGCAGCTAAGGCAACATCAGCTATAGTTGAAACTATGAGACGAAATGCGGCCATCGAAGAAGGCTTTGAGGACCAACCTAATGCTGTAATTCACATGTCAGCTCTATGGCTAGTTCCTGAGTTTGTTTTGCTTGGAATAGCTGAGGCTTTCAACCCAGTTGGGCAGGTTGAGTTTTTCTACACTTATTTCCCCAAGACAATGTCTAGTTTTGCAATGGCTCTTTTCACTCTTGAACTAGCTGCTGCTGATGTAGTGGGAAGTGTGTTGGTGAGCATTGTGGACAAGGTCACTAGTGTAGGAGGAAAGGAGAGCTGGCTATCAACTAACATTAACAGGGGCCATCTGAATTACTATTATGCACTGCTCACTTTCGTAGGTATAATTAACTACCTCTACTTTCTTGTTATTTGTTGGGCTTATGGTCCTGCTCCGGGACAAAAACCTGAAGCTTCAGCAGGCAAGGAAGAAGAGCAATTTGATTACAGGGAGTTGCCTACTtcatag 1764 0.4382 MGSSAATNEKLLENGTSSSSSRQSRKGGLRTMPFIIVNECLEKVASYGIIPNMILYLRNDYGMPIAKGTNVIYTWSAVSNILSIFGAFLSDSYLGRFLVVCIGSFSSLLGLTILWLTAMIPELRPSCESLMLVCNSATAAQLAVLFLSLGLISIGAGCVRPCSIAFGADQLTIKERSNDERLLDSYFNWYYTSVGASTAIALSVIVYIQENLGWKIGFGVPAVLMFISAVSFILGSPFYAKVKPGHSLLTSFVQVVVVAVKNRKRNLLDCNFDQYYQDHDSELMVPTDSLRCLNKACIIRNPETVSNPDGSVSDPWSQCTVGQVESVKSLLRVLPMWSTGIFMMVSLSTFSTLQANTMDRRLFGNFKMPAGSFTLIMIITLSIIIPVYDRIMVPLLAKYTGLPRGFSCKSRIGTGLLFVCAAKATSAIVETMRRNAAIEEGFEDQPNAVIHMSALWLVPEFVLLGIAEAFNPVGQVEFFYTYFPKTMSSFAMALFTLELAAADVVGSVLVSIVDKVTSVGGKESWLSTNINRGHLNYYYALLTFVGIINYLYFLVICWAYGPAPGQKPEASAGKEEEQFDYRELPTS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0682 587 Pfam POT family 98 526 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu5g0682 587 MobiDBLite consensus disorder prediction 1 26 - -
Ssu5g0682 587 SUPERFAMILY MFS general substrate transporter 29 558 IPR036259 -
Ssu5g0682 587 MobiDBLite consensus disorder prediction 566 587 - -
Ssu5g0682 587 Gene3D MFS general substrate transporter like domains 6 564 IPR036259 -
Ssu5g0682 587 PANTHER OS01G0761500 PROTEIN 22 567 - -
Ssu5g0682 587 MobiDBLite consensus disorder prediction 570 587 - -
Ssu5g0682 587 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 567 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu5g0682 587 CDD MFS_NPF1_2 32 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0682 Ssu-Chr5 16248061 16252505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0682 12 579 Organic Solute Cotransporters AT1G52190 49.915 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0682 K14638 - gmx:100783985 951.814