Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0668 ATGGACGTTCTGGTGGGTCCCACTTTCACCATCGACGTCCCGTCCTCTGCGGCGCCGCCGTACGACGCCGACCGCCCAGTCCCCTCATACGGCTTCTTCGCCGGCGACTCGTCGGAGAGCTCGTCCTCGAGCGGAACCCCGGACGACAGTGACGACGAAAACGACGCCGTTTCGTCGAAAAGAAACCAAGACGACGaaaacgaagaagaagaagtggtTCACAGCAAGTTGAAGGGTTTAGCCTCTCTTGATTCCTTAGAGGACTCTCTTCCCATCAAGAGGGGGTTATCGAATCATTTCATTGGAAAATCAAAGTCATTCACGGATCTATCTCAAGTGAGCACAGTGAAGGAACTTCAAAAGCAAGAGAACCCTTTCAACAAGCGAAAAAGGGTTCAAATAGCGTCAAAGTGGTCTAGAAAATCCTCCTTTTACGCTTGGTCTAACCCAAAATCAATGCCCCTTTTACCCGTTCATGAAGACGGAGATGAATTCGAAGCTGAGAACCCCAAAAAGGTGTcaccatcttcttcttcctcttcctcagAGGAAAAGAAACCGGAAGATCAAGTTTTGGTGAGACCGCAAAGAGTGCCTCAGTCCTATGCTGCTCATATGAGGGTTAGATTTGGGAGCTTCAAGTCTAGGAGCCTCTCGGATCTGAAGGAGCATGATGCGGAGGAAGAAGATGAGGATAATGATGAGTAG 708 0.4661 MDVLVGPTFTIDVPSSAAPPYDADRPVPSYGFFAGDSSESSSSSGTPDDSDDENDAVSSKRNQDDENEEEEVVHSKLKGLASLDSLEDSLPIKRGLSNHFIGKSKSFTDLSQVSTVKELQKQENPFNKRKRVQIASKWSRKSSFYAWSNPKSMPLLPVHEDGDEFEAENPKKVSPSSSSSSSEEKKPEDQVLVRPQRVPQSYAAHMRVRFGSFKSRSLSDLKEHDAEEEDEDNDE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0668 235 PANTHER OS08G0516900 PROTEIN 37 229 - -
Ssu5g0668 235 MobiDBLite consensus disorder prediction 148 200 - -
Ssu5g0668 235 PANTHER OS08G0516900 PROTEIN 37 229 - -
Ssu5g0668 235 MobiDBLite consensus disorder prediction 53 76 - -
Ssu5g0668 235 MobiDBLite consensus disorder prediction 214 235 - -
Ssu5g0668 235 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0668 Ssu-Chr5 15717004 15718043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0668 - - gmx:100792274 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0668 5 15717004 15718043 Ssu1g3360 1 86782921 86783964 PCT