Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0657 ATGGGTTCAATCTTTGTGAGTGTTAAAAGCATGGAGGATGTTCAATTGGATATCAGTTGGGACGATGTCCTCTGTCCTATATGCTTGGATTTTCCTCATAATTGTGTTCTCCTCCAGTGTTCATCTTACGATAAAGGATGCCGTGCATTTGTTTGTGACACAAATCAATTGCACTCAAACTGTTTGGATCGTTTTAAAAATGCATGTGGCATGCCATCCTCTCCAGGGTCTAATGCAGCTTCTGCCGAAAATAGTGATCCTGAGGTATCAAATGGTCAATGCAATCTGATTTGCCCCTTATGTAGAGGTGAGGTTTCTGGGTGGATTATAGTTGATAAAGCTCGTGCTCATCTTGATGAGAAGAAGCGTTGTTGTGATGAGGTGCAATGTACATTCATGGGAAGTTACATGGAACTACAAAAACATGCTCAACTTGAACACCCTCATGCACGCCCATCAAAATTGATCCTGCCCGCCAGCTTGATTGGGAGAATTTTCAACAATCATCAGAGATCATAG 519 0.42 MGSIFVSVKSMEDVQLDISWDDVLCPICLDFPHNCVLLQCSSYDKGCRAFVCDTNQLHSNCLDRFKNACGMPSSPGSNAASAENSDPEVSNGQCNLICPLCRGEVSGWIIVDKARAHLDEKKRCCDEVQCTFMGSYMELQKHAQLEHPHARPSKLILPASLIGRIFNNHQRS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0657 172 Pfam Protein of unknown function (DUF1644) 21 154 IPR012866 -
Ssu5g0657 172 PANTHER OS01G0612600 PROTEIN 9 171 - -
Ssu5g0657 172 PANTHER OS02G0150900 PROTEIN 9 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0657 Ssu-Chr5 15419182 15419700 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0657 - - gmx:100810216 289.656