Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0644 ATGGCCATGGATGGGCAACAATCATCAGAAGAAGTATTAGCAGCAGAAAATGGGAGAGAATCAGAGGACTATAGCGAAGGGAGAGAAAAGGGTCCTCATCCCCTGGCTCAAGCTGGAACTGGGTCTCTCCCTGGTGGCTTCATTGGGAAACATAGGTTGCAAGCAGCCATAACCCACCTCAATGACCAAATTAGTATTTTGCAGGAAGAATTGGAAAAAGTTGAAACAATAGGTGAATCCTCCACCGTGTGCAAGGATGTAATTTCGAGCGTTGAATCCATTCCAGATCCTCTCCTTCCATACGCTAAAGGTTCGGTCGATGCTGGTTGGGATCGATGGTTCGGAGGTACCCACCACTCTCGAAATCATAAACGCTGGATTTag 384 0.4688 MAMDGQQSSEEVLAAENGRESEDYSEGREKGPHPLAQAGTGSLPGGFIGKHRLQAAITHLNDQISILQEELEKVETIGESSTVCKDVISSVESIPDPLLPYAKGSVDAGWDRWFGGTHHSRNHKRWI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0644 127 MobiDBLite consensus disorder prediction 15 30 - -
Ssu5g0644 127 Pfam GGL domain 63 115 IPR015898 GO:0007186
Ssu5g0644 127 MobiDBLite consensus disorder prediction 1 43 - -
Ssu5g0644 127 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 2-LIKE 15 127 - -
Ssu5g0644 127 Coils Coil 50 77 - -
Ssu5g0644 127 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1 15 127 IPR045878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0644 Ssu-Chr5 15079095 15080167 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0644 K24772 - gmx:100798973 227.639