Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu5g0640 | ATGGCTACCACACCACACGCCCAATCGCAGTGGGAATTCAGCTGTGACCTGGAAGTGGATTTTGGATCAGAAGAGAATGCTTCCATTGTATATGCTGCCTTAGCTGTTGACAAAGAGTTGCAACCTGATAAAATAAGACGACTCATGACAGTGTCTGATGGAAAGTTATCAGTGCACTTTGAGGCAACAGAAGCCAGAATTCTTCGGGCATCATTTAGTGCTTTTGTGGATGTCCTGACACTAGCCACGAAAACTATTGAAGAATTTGGTCAAGGAATGAAGTTGTGA | 288 | 0.4375 | MATTPHAQSQWEFSCDLEVDFGSEENASIVYAALAVDKELQPDKIRRLMTVSDGKLSVHFEATEARILRASFSAFVDVLTLATKTIEEFGQGMKL | 95 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu5g0640 | 95 | Pfam | Transcription factor Pcc1 | 14 | 87 | IPR015419 | - | |
| Ssu5g0640 | 95 | PANTHER | GEO08993P1 | 6 | 93 | - | - | |
| Ssu5g0640 | 95 | Gene3D | - | 3 | 93 | - | - | |
| Ssu5g0640 | 95 | PANTHER | EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER | 6 | 93 | IPR015419 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu5g0640 | K15902 | - | gmx:100527271 | 159.458 |