Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0636 ATGGAAAAACCACCCGAAGCCGAAGAGGCTTCATCACAGTCACAAGACTCATCGCGAGATCACCAGACCTGGATAACTGCACAAGACATTCTCAGGGAAAAACTGATCACGGAGGACAGTTTCGCATGGAAATTACCCACCACAGGCGCATCACAAGCTGGTTCTACAGAGGAAAAAGAAGCATTGAGATACGTTGGTGGGGTTGACATAAGCTTCTCAAAGGATGACCCATCAGCGGCATGTGGCACCCTTGTAGTGTTGGACTTCCACACTCTTCAAGTTGTATATCAGGACTTCTCTTTGGTCACTCTTCAAGTCCCCTATGTGCCTGGCTTCCTTGCATTTAGAGAGGCCCCAGTTCTTCTACAGCTTCTAGAGAAAATGAAGAGGAGTGATAATCCTTTCTACCCTCAgTTGTTAATGGTTGATGGAAATGGAATACTTCATCCCCGAGGTTTTGGGCTCGCTTGTCATATTGGAGTTGAGACCAATCTCCCAACAATTGGGATTGGAAAGAATTTGCATCATGTGGATGGTCTTAATCAGTCTAGAGTGAGAAAACTTCTTGGAGCTGAAGAAAACTCTTCtaaggattttattaatttggtgGGTTGTTCTGGGCATATATGGGGAGCGGCCATGAGATCTATACAGGGATCCATAAAACCAATATTCATATCAATTGGTCACAGGATATCTCTTCAGACTGCCATTATGATTGTTCAAATGACTTGCAAGTATCGGGTGCCTGAGCCAATTAGGCAGGCTGACATAAGATCTAGAGACTACATTCGGAAGCTTGAAATGCCAAAGTAA 816 0.435 MEKPPEAEEASSQSQDSSRDHQTWITAQDILREKLITEDSFAWKLPTTGASQAGSTEEKEALRYVGGVDISFSKDDPSAACGTLVVLDFHTLQVVYQDFSLVTLQVPYVPGFLAFREAPVLLQLLEKMKRSDNPFYPQLLMVDGNGILHPRGFGLACHIGVETNLPTIGIGKNLHHVDGLNQSRVRKLLGAEENSSKDFINLVGCSGHIWGAAMRSIQGSIKPIFISIGHRISLQTAIMIVQMTCKYRVPEPIRQADIRSRDYIRKLEMPK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0636 271 PANTHER ENDONUCLEASE V 8 266 IPR007581 GO:0004519|GO:0006281
Ssu5g0636 271 PANTHER V, PUTATIVE-RELATED 8 266 - -
Ssu5g0636 271 Hamap Endonuclease V [nfi]. 7 267 IPR007581 GO:0004519|GO:0006281
Ssu5g0636 271 MobiDBLite consensus disorder prediction 1 15 - -
Ssu5g0636 271 Gene3D archaeoglobus fulgidus dsm 4304 superfamily 9 267 - -
Ssu5g0636 271 Pfam Endonuclease V 57 257 IPR007581 GO:0004519|GO:0006281
Ssu5g0636 271 MobiDBLite consensus disorder prediction 1 22 - -
Ssu5g0636 271 CDD Endonuclease_V 22 262 IPR007581 GO:0004519|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0636 K21813 - gmx:100527675 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0636 5 14938100 14941603 Ssu5g0636 5 14938100 14941603 ECH