Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0603 ATGGTGGAGGCCAAAGCCAAAGGGAGTGTGGAAGGGTGGCTTACAAACCTTGACAGGGAAAAGGAATTCCAACTTGTGTATTGGGAGGACATGTTTCACAAGCCCTACTATTGGTCCACCTTTTATGTCCAGCTGACTGAATTTGAAGAAGGTGGATTAGCAATTGGCCTAAGCTGCGTTCATCTCTTGGCAGATTCCACCTGTGCAACCACATTCATGAAAGCCTGGGCTGACATTTCATTAGGCAACAAAATGACTACTCCTCCGCTATTCCTCCCTTTATCTCCTCGAACACCAGGAAATAGAAACCCCAAGTCATCACCCCTACATGGAGTTGATACATCACTATAA 351 0.4587 MVEAKAKGSVEGWLTNLDREKEFQLVYWEDMFHKPYYWSTFYVQLTEFEEGGLAIGLSCVHLLADSTCATTFMKAWADISLGNKMTTPPLFLPLSPRTPGNRNPKSSPLHGVDTSL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0603 116 MobiDBLite consensus disorder prediction 91 116 - -
Ssu5g0603 116 MobiDBLite consensus disorder prediction 99 116 - -
Ssu5g0603 116 Gene3D - 1 107 IPR023213 -
Ssu5g0603 116 Pfam Transferase family 2 91 - -
Ssu5g0603 116 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 107 - -
Ssu5g0603 116 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0603 Ssu-Chr5 13605755 13606949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0603 2 88 Acyl Lipid Metabolism Gene Families AT3G23840 34.483 3.28e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0603 - - gmx:100804090 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0603 5 13605755 13606949 Ssu5g0603 5 13605755 13606949 ECH