Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0601 ATGGGTGACAAAAAGAAGAAGGCTCAGATGTTTGTAAAACTAGTGTCTGCTGCTGGGACTGGATTCTTCTATGTTAAGAGGAAGCCGAGGCAGTTTACAGAGAAACTTGAGTTCCGAAAATATGATCCTAGGGTTAATCGTCATGTTCTGTTTACAGAGGCTAAAATGAAGTGA 174 0.408 MGDKKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0601 57 TIGRFAM rpmG_bact: ribosomal protein bL33 4 57 IPR001705 GO:0003735|GO:0005840|GO:0006412
Ssu5g0601 57 SUPERFAMILY Zn-binding ribosomal proteins 4 55 IPR011332 GO:0006412
Ssu5g0601 57 PANTHER 54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL 1 57 - -
Ssu5g0601 57 Gene3D Ribosomal protein L33 3 57 IPR038584 -
Ssu5g0601 57 PANTHER 54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL 1 57 - -
Ssu5g0601 57 Pfam Ribosomal protein L33 12 55 IPR001705 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0601 Ssu-Chr5 13602744 13602917 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0601 K02913 - gmx:100778721 118.242