Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0599 ATGGTTGGTGAAGGAGGAAAACCAAAGGCAGTGATAGTGGGGGGTAGCATAGCTGGGATATCAAGTGCACATGCTCTTACCTTAGCTGGTTGGGATGTTCTTGTGCTGGAGAAAACCACCTCACCTCCAACTGGAAGCCCCACTGGTGCAGGTCTTGGACTCAACTCTTTGTCCCAACAAATCATTCACTCATGGATTCCACACCCACAACTCCTACACAACACCACTTTACCACTAACCATTGATCAGAACCATGCAACTGATAGTGACAAGAAGGTTAGCTGCACATTGACAAGAGATGAGAGTTTTAACTTCAGAGCAGCACATTGGGCTGATCTTCATGGTCTTCTGTACAATGCACTGCCATCAAATGTACTTTTATGGGGTcacctttttctctctttccatgTTGCTGATGATAAGGGTTCTGTCATAGTAAAGGCTAAAGTACTACAAACTGGCAAGGTTATAGAAATAGTAGGGGATTTGCTCGTTGCAGCAGATGGTTGTCTCTCTTCCATCCGCCAGAAATATCTCCCTGATTTTAAACTCAGATATTCGGGCTATTGTGCATGGAGAGGGgttcttgatttttcaaaaattgagaaTTCAGAAACCATCATTGGTATAAGAAAGGCTTACCCTGATCTTGGAAAATGCTTGTACTTTGACTTGGCCTCAGGCACTCACAGTGTGCTGTATGAGCTGCTGAACAAAAAGCTCAATTGGATTTGGTATGTGAATCAACCAGAGCCTGAAGTGATGggaACATCAGTGACAATGAAAGTAAATAGTGACATGATCCAGAAGATGCACCAAGAAGTAGAAAAAGTTTGGATTCCTGAGTTGGTAAAGGTCATAAAAGACACAAGGGACCCtttcttaaatttcatatatgatAGTGATCCCTTAGAGAAGATCTTTTGGGATAATGTGGTATTGGTAGGAGATGCAGCTCACCCCACAACTCCTCACTGCCTTAGAAGCACAAATATGTCAATATTAGATGCAGCAGTGTTAGGCAAATGCCTTGAGAAGTTCGGAGCAGAAAAACTAGGATCAGCTTTAGAAGAATATCAGTTCATCAGGCTACCAGTAACTTCCAAGCAAATTCTGCATGCAAGGCGTGTAGGCCGTATAAAACAAGGTTTGCTTCTCCCTGATCGAGAACCTTTTAACCCCAAGTCAGCCAAGAAAGAGAACTGTGAGGAACTTCTACAAAGAAACGTTCCTTTTTTCAATGATGTGCCTCTGTCACTTGCTTCAATTCTACCCTCCATTTGA 1284 0.4104 MVGEGGKPKAVIVGGSIAGISSAHALTLAGWDVLVLEKTTSPPTGSPTGAGLGLNSLSQQIIHSWIPHPQLLHNTTLPLTIDQNHATDSDKKVSCTLTRDESFNFRAAHWADLHGLLYNALPSNVLLWGHLFLSFHVADDKGSVIVKAKVLQTGKVIEIVGDLLVAADGCLSSIRQKYLPDFKLRYSGYCAWRGVLDFSKIENSETIIGIRKAYPDLGKCLYFDLASGTHSVLYELLNKKLNWIWYVNQPEPEVMGTSVTMKVNSDMIQKMHQEVEKVWIPELVKVIKDTRDPFLNFIYDSDPLEKIFWDNVVLVGDAAHPTTPHCLRSTNMSILDAAVLGKCLEKFGAEKLGSALEEYQFIRLPVTSKQILHARRVGRIKQGLLLPDREPFNPKSAKKENCEELLQRNVPFFNDVPLSLASILPSI 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0599 427 PANTHER MONOOXYGENASE-LIKE 6 419 - -
Ssu5g0599 427 SUPERFAMILY FAD/NAD(P)-binding domain 8 382 IPR036188 -
Ssu5g0599 427 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 - -
Ssu5g0599 427 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 324 340 - -
Ssu5g0599 427 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 - -
Ssu5g0599 427 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 324 - -
Ssu5g0599 427 Gene3D - 9 385 IPR036188 -
Ssu5g0599 427 SUPERFAMILY FAD-linked reductases, C-terminal domain 185 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0599 Ssu-Chr5 13590791 13593100 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0599 - - gmx:100811757 759.599