Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0598 ATGGTAGGGGAAGGAAAGCCAAGGGCAGTGATTGTTGGTGGTAGCATAGCTGGGATATCAAGTGCACATGCTCTTACCTTAGCTGGTTGGAATGTCATTGTGCTTGAGAAAACCAATGCACCTCCTACAGGAAGTCCTACTGGTGCAGGTCTTGGACTTGACCCTCTATCTCAAAGAATCATTGAGTCATGGGTTCCACAGCCAAAACTCATCCACAACATCACTGTACCACTAACTATAGATCAGAACCAGGCAACTGATAGTGAGAAGAAGGTCAGTAGGACATTGGCCAGAGATGAGAGTTTTAACTTCAGAGCAGCACATTGGGCTGATGTTCATGGTCTTCTGTGCAATGCACTGccatcaaatatatttttatggggtcacctttttctctctttccatgTTGCACATGATAAGGGTTCTGTCATGGTAAAGGCTAAGGTTCTGGAAACTGGCAAGGTTATAGAGATAGTAGGGGATTTGCTTGTTGCAGCTGATGGTTGTCTCTCTTCCATCCGCCAAAAATATCTCCCTGATTTTAAACTCAGATATTCGGGCTATTGTGCATGGAGAGGGGTCtttgatttttcagaaactGAGACTTTAGAAACCATCAAGGGCATAAGAAAGGCATACCCTGATTTAGGAAAATGCTTGTACTCCGATGTGGGCTCATGTACACACAATGGTTTCTATGAGCTTCTAAACAAACAGCTCAATTGGATTTGGTATGTGAATCAGCCAGAGCCTGAAGTTAAGGGAACCTCAGTGACCATGAAAGTAAGTAGTGACATGATCCAAAAGATGCACCAAGAAGCAGAAAAAGTTTTGACCCCGGAGTTGTTTAAGGTCATGAAAGAAACAAAGGACCCCTTCTTAAATGTCATATATGATAGTGAACCTTTGGGAGAGATCTTTTGGGACAACGTGGTATTCGTAGGAGATGCAGCTCACCCTACAACTCCTCACTGCCTTAGAAGCACAAATATGTCAATATTAGATGCAGCAGTGTTAGGCAAATGCCTTGAGAAGTTTGGAGCAGAAAAACTGAGATCAGCTTTGGAAGAATATCAGTTCATCAGACTTCCAGTAACTTCCAAGCAAGTTCTGCATGCACGGCGTCTAGGCCGCATTAAACAAGGTCTGGTTCTCCCTGATAGAGAACCTTTTAACCCCAAGTCAGCCAAGAAAGAGGACTGTGAGGAACTTCTACAAAGGAACACTCCTTTTTTCAATGATGTGCCTTTGCTACTTGCTTCAATTCTACCCTCCACAGTTAGCAGTTTGAATGGTTTAGGTGTGTACTTCTCACCGATTCAAGTTAACATGTGTCACCAGATCACAAGGAAAGAAAGATCTTAA 1365 0.4154 MVGEGKPRAVIVGGSIAGISSAHALTLAGWNVIVLEKTNAPPTGSPTGAGLGLDPLSQRIIESWVPQPKLIHNITVPLTIDQNQATDSEKKVSRTLARDESFNFRAAHWADVHGLLCNALPSNIFLWGHLFLSFHVAHDKGSVMVKAKVLETGKVIEIVGDLLVAADGCLSSIRQKYLPDFKLRYSGYCAWRGVFDFSETETLETIKGIRKAYPDLGKCLYSDVGSCTHNGFYELLNKQLNWIWYVNQPEPEVKGTSVTMKVSSDMIQKMHQEAEKVLTPELFKVMKETKDPFLNVIYDSEPLGEIFWDNVVFVGDAAHPTTPHCLRSTNMSILDAAVLGKCLEKFGAEKLRSALEEYQFIRLPVTSKQVLHARRLGRIKQGLVLPDREPFNPKSAKKEDCEELLQRNTPFFNDVPLLLASILPSTVSSLNGLGVYFSPIQVNMCHQITRKERS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0598 454 PANTHER MONOOXYGENASE-LIKE 4 418 - -
Ssu5g0598 454 SUPERFAMILY FAD/NAD(P)-binding domain 7 381 IPR036188 -
Ssu5g0598 454 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 323 339 - -
Ssu5g0598 454 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Ssu5g0598 454 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 - -
Ssu5g0598 454 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 323 - -
Ssu5g0598 454 Gene3D - 8 386 IPR036188 -
Ssu5g0598 454 SUPERFAMILY FAD-linked reductases, C-terminal domain 184 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0598 Ssu-Chr5 13584991 13588905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0598 1 357 Miscellaneous Gene Families AT5G05320 23.575 1.84e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0598 - - gmx:100811757 700.279