Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0591 atgcttttttctcttttcttccgtCTTCTTCCCTTTTCACGTCATTATCCCAAAGTTGCAGAGTTTCACATCCCAGACAACATGAAGGGAATAAGGTTCATGCTTCTGTCGGTGCTCTTGTGTGCCACCATTCATGTCTCCTTCTCCATTACTGACGGACTAGTGGCGAATGGGAACTTCGAGTTGGGGCCAAAGCCCTCGGATCTGAAAGGAACGGTGGTGGTTGGCGGGAGCCGCTCCATTCCGGAGTGGGAGATCTCGGGCTTCGTGGAGTACATAAAATCGGGGCAAAAACAGGGCGACATGTTGCTGGTGGTGCCGGAGGGTGCGTACGCGGTGAGGCTCGGGAACGAGGCCTCCATCAAGCAGAGGATAAAAGTGACTAAGGGGATGTACTATTCCATCACGTTCATGGTGGCGCGCACGTGCGCGCAAGAGGAGAGGCTCAACATTTCTGTGACCCCTGACTGGGGCGTGATCCCGATACAGACGTTGTACACCAGCAGCGGCTGGGATCCCATTGCTTTTGGGTTCAGAGCGGAGAACGAAACGGTGCAGATGCTTATTCATAACCCTGGAAAGGAGGAGGATCCCGCGTGTGGCCCGCTTATTGACTCCGTTGCTCTCAGGACTCTCTACCCTCCCAGAGCTACTAACCAGAACATATTAAAGAATGGTGGTTTTGAAGAAGGACCCTATGTGTTCCCCAACTCATCATGGGGTGTGATCATCCCTCCCAACATTGAGGATGACCACTCTCCCCTCCCAGGGTGGATGGTGGAGTCCCTAAAGGCAGTGAAGTACATAGACTCATACCACTTCTCAGTCCCGAGGGCAAAAGAGCCGTGGAGCTAG 855 0.5216 MLFSLFFRLLPFSRHYPKVAEFHIPDNMKGIRFMLLSVLLCATIHVSFSITDGLVANGNFELGPKPSDLKGTVVVGGSRSIPEWEISGFVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQRIKVTKGMYYSITFMVARTCAQEERLNISVTPDWGVIPIQTLYTSSGWDPIAFGFRAENETVQMLIHNPGKEEDPACGPLIDSVALRTLYPPRATNQNILKNGGFEEGPYVFPNSSWGVIIPPNIEDDHSPLPGWMVESLKAVKYIDSYHFSVPRAKEPWS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0591 284 Gene3D - 112 244 - -
Ssu5g0591 284 Pfam Protein of unknown function (DUF642) 53 210 IPR006946 -
Ssu5g0591 284 SUPERFAMILY Galactose-binding domain-like 51 210 IPR008979 -
Ssu5g0591 284 PANTHER OS02G0527500 PROTEIN-RELATED 34 280 - -
Ssu5g0591 284 PANTHER PLANT/F18G18-200 PROTEIN 34 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0591 Ssu-Chr5 13335588 13341966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0591 - - gmx:100776765 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0591 5 13335588 13341966 Ssu5g0591 5 13335588 13341966 ECH