Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0551 ATGGGCACCAAGGTCAGGAGACCCTCCCATGCTGGTTCTTGGTACACCGACAATCcTAAGGAGCTTTCGGAGGAACTGGAAGGGTGGCTGCAATCGTGTGGTTTGACCAAGTCTCCTGATGTAAGAGGAGTGATAGCACCACATGCAGGTTATTCATATTCAGGAAGAGCTGCTGCTTATGCCTTTGGAAACATTGATCCATCAAACATTTTGCGTGTGTTCCTTCTTGGTCCTTCTCACCACTATTATACCCCAAAATGTGCTCTTTCAACTGCAACTGTCTACAAGACACCCATAGGGGACCTGCCTATTGATTTGGAAGTAATGGAGGAGCTTAAAGCTACGGGGAAATTTGAACTGATGGATATTCGTGTTGATGAGGCTGAACATAGCATGGAAATGCACCTGCCATATCTTGCCAAAGTATTTGAAGGGCACCAGGTGAAAGTTGTACCCATTTTAGTTGGTGCTGTTAGTGCTGAAAATGAAGCTATGTATGGGCAGATTCTTGCCAAATACGTAGATAATCCCAGTAACTTCTTCTCTATTTCATCAGACTTTTGTCACTGGGGATCTCGATTCAATTACATGCACTATGACAAGAAACATGGGTCTATATACAAATCTATTGAGGCCTTAGACAAGATGGGCATGGATATCATAGAAACAGGAGATCCAGATTCATTCAAACAATATCTGTTGGAATATGACAATACAATCTGTGGACGCCATCCAATTAGTGTTTTTCTTCATATGCTGAGGAACTGCTCGACAaagataaatatcaaatttcttcGCTATGAGCAGTCCAGTCAGTGCAAAAGTACCAGGGATAGTAGTGTTAGTTATGCGTCAGCAGCAGCAAAAACTGATGATTCAAGCTCCAGTTGA 891 0.4209 MGTKVRRPSHAGSWYTDNPKELSEELEGWLQSCGLTKSPDVRGVIAPHAGYSYSGRAAAYAFGNIDPSNILRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPIDLEVMEELKATGKFELMDIRVDEAEHSMEMHLPYLAKVFEGHQVKVVPILVGAVSAENEAMYGQILAKYVDNPSNFFSISSDFCHWGSRFNYMHYDKKHGSIYKSIEALDKMGMDIIETGDPDSFKQYLLEYDNTICGRHPISVFLHMLRNCSTKINIKFLRYEQSSQCKSTRDSSVSYASAAAKTDDSSSS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0551 296 TIGRFAM AmmeMemoSam_B: AmmeMemoRadiSam system protein B 6 287 - -
Ssu5g0551 296 MobiDBLite consensus disorder prediction 276 296 - -
Ssu5g0551 296 CDD MEMO_like 7 278 IPR002737 -
Ssu5g0551 296 PANTHER BNAA09G41020D PROTEIN 4 290 - -
Ssu5g0551 296 Pfam Memo-like protein 8 286 IPR002737 -
Ssu5g0551 296 Gene3D - 4 290 - -
Ssu5g0551 296 Hamap MEMO1 family protein <locus_tag>. 4 289 IPR002737 -
Ssu5g0551 296 PANTHER PROTEIN MEMO1 4 290 IPR002737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0551 Ssu-Chr5 12120272 12123434 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0551 K06990 - gmx:100815790 547.74