Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0547 ATGGCGAGTTCTTCTTCAAGAACAAAATCTAGTGGACAAGTGCTTCGTTCTCTGTCACCTTCTAGTAGCTTCTGTTCGTATTCAACATCAAACGCACCGTTTCACTCACCCTCGTCCAGCTTCTTCAACAAACCTCACTCGCACGCCCCGCACCGCGCCACTTCCCCGACACGTGTCAACCTATACAGCGCCGCGCCCCTGCCCTCCCCCTCGGTCCGATTCTCACTTGACCGGTCCATCTCCCCGAACCGGACCGTGTCGAGCCACGTCGTCGCGAAGAACCGCCACGTCACGGTCCAGAAGAGAACGTGCACGTGCTCCCCGACAACGCATCCCGGTTCGTTCCGGTGCAGCCTCCACAAGAACCACCGCCACACGCCGGCCGGCTCGTTTCCGTCGAACCGGCTCAACATCATGCGCCGGTCCGCGATGAAGAACTCGCTTGTGAGAATCGGAGGCGTCGAAGGCGAGTGGGTGAAACGCGCCCTCACCGCGCTGATTCGTCCTTCGTCGCATCAACAGAGGAGAAGATCGGCGTTCGAACCGAGACTGAGTCGTCTTTCAATCATGTCCAAGACTCAGGAATAA 588 0.5833 MASSSSRTKSSGQVLRSLSPSSSFCSYSTSNAPFHSPSSSFFNKPHSHAPHRATSPTRVNLYSAAPLPSPSVRFSLDRSISPNRTVSSHVVAKNRHVTVQKRTCTCSPTTHPGSFRCSLHKNHRHTPAGSFPSNRLNIMRRSAMKNSLVRIGGVEGEWVKRALTALIRPSSHQQRRRSAFEPRLSRLSIMSKTQE 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0547 195 MobiDBLite consensus disorder prediction 1 27 - -
Ssu5g0547 195 PANTHER OSJNBB0118P14.9 PROTEIN 4 193 - -
Ssu5g0547 195 PANTHER - 4 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0547 Ssu-Chr5 12043017 12043604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0547 - - gmx:100780557 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0547 5 12043017 12043604 Ssu5g0547 5 12043017 12043604 ECH
Ssu6g0938 6 15171137 15171721 Ssu5g0547 5 12043017 12043604 ECH