Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0535 ATGTCGGTGTCTGTAGAGCGCGAAATTGCGTCGTTTCGGGATTCTGAAACTCGTAACAATCTTCGAAGAATTCTTCAGTCATGCTCTAAATTGGCTGAGGCTGGAGATTTTCATGAGTCTGAAAACACAGTTTCGGAGGTTGTCAAGTTTCTTGATTCTTTGTTGGATGCTGCCGTGTCTGACCCAGATAGTGAAAATGCAGAGAATGTTGCATTTGAAGCTATCTCTGAGATCCATCGATATGTTTGTTCTTCTCCTGATCAGGAAGTTGCTGATGCCCTTTCCTTTGAACTGCCAAAGGTTGTTTCAAAGTTTGTGGggatttcaagtaaatttttGGACTTGGCAATTAGCATCATCGATCAGTTTATTGTGAAATGTGGTCCAAGGGATATGCTCTCAATTCTCTGTAATACATTAGGTCACTCAAGTAAGATGACCAAGGCTGCCAGTTACATTGTCCCTCCTTTATCAGGGCTCTCAAAGGTCTTTATTTCCATTCAGAGGCGTCAGTTTGAGCAAGCAAAAGAAGCTGTTCCTATAATTCTTAATGTATTGAAGGCTGTGTCTTTGGAGTCAGAAGAAGCAGAACTTGAGGATGTATTTGACAGAGCTGTTGAGATTGCGAATTCTATATATGAAGTTTGCAATAAGTTGGAGAGGGATGCAAAGGAGAAGCTCCGAGCTCTTCTTGGTCTATATGTCCTGCAATGCATGGCTCTTGTTTCGGCTAGCATAAGCTATAAAGCTTCCAGTTGTCATTCGTTGGTATTACAACTGTCACAAATTTCTTCATATTGTGGTTTATCATATCTCAGTCTAGTAACTACTTATGATGTTGAGATTGTGGCTGGCTCCATTTTTGTAGGAGATAAAGATCACTATATGAGTTGTTTATCTCACGTCAAACATGGTGCTGCTCTTTCAGtGATTTGGGGGCATGTTTCGGAGGAGGTTGCTCATACTACTAAAGAGGATTTGATTGCCATCAAGGATGAACTTCGTAATAACCAGACAAAAAGGTGGCAAGCAATAGGAACATTAAAGCATGTACTTTCCTTTGTAAATCTACCATGGGAGTTAAAGAAACATGCTATCGACTTCTTGCTTTGCATCACAGATGGAGATGTCTCCAGAAACTATAACGTGGAACATTCTGAATGGTCATCTTATATGCCAAGTCTTTTCTCGGCTTTGCAGGCTGTAAAAATGGTTATCATGTATGCCCCAGACCCAGAACTTAGAAAAAAATCCTTTGCTGTGCTAAAAGGAGTACTTGCTGATATTCCAATTTCTCAAAGATTTGACATTTTGAAAGCATTAATTACAAATTCCGACTCTTCCTCGATGATCGCCATTTTCATCGATCTTGTCAGGAAGGAAATGCACACAGCAATCTGCAGTAGTAGATCAATAGTAAAAGATGCCTCGCAGATAGATAACAAAGCATTTCCAGATACATCATTTTGGAATCCCAGTGTCCTTGAGTtggtggagttggttctaagaCCTCCACAGGGTGGACCTCCTTCCCTGCCTGAGCAGAGTGATGCGGTGTTGTCAGCCCTCAACCTATACAGATTTGTATTGATGACAGAATCTGCAGAAAAGACAAACTACACTGGAGTCTTGTCAAAGAACAGTTTACTGAAGGCCTACAATGAATGGCTGCTTCCTTTACGTGCCTTAGTGACTGGTATAATGGCAGAGAGCAAGAATGATTATGATGAGCTTGCAGGTGACACTGTTTGCACCCTAAATCCACTTGAGTTGGTGTTGTACCGGTGCGTTGAACTTATAGAAGAGAAGCTAAAGCAATCTACATAA 1827 0.4028 MSVSVEREIASFRDSETRNNLRRILQSCSKLAEAGDFHESENTVSEVVKFLDSLLDAAVSDPDSENAENVAFEAISEIHRYVCSSPDQEVADALSFELPKVVSKFVGISSKFLDLAISIIDQFIVKCGPRDMLSILCNTLGHSSKMTKAASYIVPPLSGLSKVFISIQRRQFEQAKEAVPIILNVLKAVSLESEEAELEDVFDRAVEIANSIYEVCNKLERDAKEKLRALLGLYVLQCMALVSASISYKASSCHSLVLQLSQISSYCGLSYLSLVTTYDVEIVAGSIFVGDKDHYMSCLSHVKHGAALSVIWGHVSEEVAHTTKEDLIAIKDELRNNQTKRWQAIGTLKHVLSFVNLPWELKKHAIDFLLCITDGDVSRNYNVEHSEWSSYMPSLFSALQAVKMVIMYAPDPELRKKSFAVLKGVLADIPISQRFDILKALITNSDSSSMIAIFIDLVRKEMHTAICSSRSIVKDASQIDNKAFPDTSFWNPSVLELVELVLRPPQGGPPSLPEQSDAVLSALNLYRFVLMTESAEKTNYTGVLSKNSLLKAYNEWLLPLRALVTGIMAESKNDYDELAGDTVCTLNPLELVLYRCVELIEEKLKQST 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0535 608 SUPERFAMILY ARM repeat 9 523 IPR016024 -
Ssu5g0535 608 Pfam Uncharacterised protein family, YAP/Alf4/glomulin 394 574 IPR013877 -
Ssu5g0535 608 Pfam Uncharacterised protein family, YAP/Alf4/glomulin 69 256 IPR013877 -
Ssu5g0535 608 PANTHER GLOMULIN 17 607 IPR019516 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0535 K23345 - gmx:100817784 1019.61