Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0526 ATGGCTTCTCTCATTCGAACGCTTCAAAGAGCTTGTAGATGGAAACGAAACTGTTCCTCATCACTTCTTCGAACCCTGAGAGTGAAAAGCGCACTCTCTGCCACCTCGCGTTTCGGAACCAGAACTTACGCAGCAGAACCAGAACCAGCGACCAAATCGCCCTTCGATTCCAACATTCGACGAATTCTCCAAAACGAAATCGAGTACCAACACGAATACGCTCCTCCACACCAGCCTGAGACTAAATTCAATTCGTTTACGGTTGAAGAGCGACGTGGCGAGCAAGTGGTCACTATAAAGGGGAAGTTTGGGGAATGTGAGGATATTAAAATTGAGGCTACGATGTTTGATGGGTTTGAACATGTTCCTGCGTGTGGAGATGATAGTTCTGGGGTGAATGTGCGTCTTCGCCTAAGTTTAATAGTGGATATATCGAAGGGGGAAGGTGACAGTGAGTTAGAGTTTGTGTGCTCGGCGTGGCCGGAGAGTTTGAATGTTGAGAAAGTTTACATATTAAGGCGCGGTTGTATGCCGGCTAGGTCTTACATTGGACCTGATTTCAGGGGCCTGAATGCTAAGGTTCAGGAGAAGTTTTATGAGTACTTGGATGCAAGGGGAGTGAATAATGAGCTTGTGGTTTTCTTGCATGAATATATGATGAACAAGGATAGAATTGAGCTTCTGCACTGGATGGATAGTCTCAAGTCTTTTGTGGAAAGATAG 723 0.4564 MASLIRTLQRACRWKRNCSSSLLRTLRVKSALSATSRFGTRTYAAEPEPATKSPFDSNIRRILQNEIEYQHEYAPPHQPETKFNSFTVEERRGEQVVTIKGKFGECEDIKIEATMFDGFEHVPACGDDSSGVNVRLRLSLIVDISKGEGDSELEFVCSAWPESLNVEKVYILRRGCMPARSYIGPDFRGLNAKVQEKFYEYLDARGVNNELVVFLHEYMMNKDRIELLHWMDSLKSFVER 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0526 240 PANTHER COMPLEMENT COMPONENT 1 1 239 IPR003428 GO:0005759
Ssu5g0526 240 Gene3D Mitochondrial glycoprotein 55 238 IPR036561 -
Ssu5g0526 240 PANTHER BNAA03G51840D PROTEIN 1 239 - -
Ssu5g0526 240 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 55 239 IPR036561 -
Ssu5g0526 240 Pfam Mitochondrial glycoprotein 63 238 IPR003428 GO:0005759
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0526 Ssu-Chr5 11433803 11435209 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0526 K15414 - gmx:100786969 392.119