Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0506 ATGGCGACCTCCGTCGCAGTTGGTGGCACTTTTACGGCTCACGATCGCCGGATTCTCACGGCGGTGAACGCCGGAGCGTCGAGCCTGTCGTTGGCGGGTTCCAGCTTCATTGTACTGTGCTACCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGCTCGTTTTCTACCTCGCCCTCTCGGATATGCTTTGCAGTTTCTTCAGCATAATAGGGGACCCGTCCAAAGGTTTCTTTTGTTATGCTCAGGGCTATAGCACGCATTTCTTTTGTGTGGCATCATTTCTATGGACTACAACAATTGCTTTTACCCTGCACCGCACTGTTGTAAAACACAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTCTGGGGTACTTCCCTGGTTATGACAGTTATGCGCTCCTTTGGTAATGACCATAGACAGTTTGGTGCATGGTGTTGGACTCAAACAGGTCGCACAGGGAAGGCAGTtcattttgtaacattttacATGCCACTTTGGGGTGCAATTCTGTATAATGGGTTTACATACTTTCAAGTAATACGCATGCTGAATAATGCAACCcgtATGGCAGTTGGTATGTCAGGCCAAGCTTTTGTGTCAGATACAAGAGATAACATGAGGGCTCTGAATCGCTGGGGATACTATCCACTAATTCTGATAGGATCATGGGCTTTTGGCACTATTAACCGTATTCATGATTTTTTTGAGCCCAACCATAAGATCTTTTGGCTCACTTTTCTTGATGTTGGAACAGCTGCTCTTATGGGCCTCTTTAACTCAATTGCTTATGGTCTCAACTCTTCTGTTCGTCGTGCAATTTGTGAAAGACTGGACAAGTTCTGGCCTGAGAGATTGTACAGATGGCTCCCTAACAATTTGAAGTACAAGAACCTACAGCAAGAAAGTGAACTAGTTTTGTTCAAAACCGAAGATCAATAA 957 0.4441 MATSVAVGGTFTAHDRRILTAVNAGASSLSLAGSSFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFSIIGDPSKGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSFGNDHRQFGAWCWTQTGRTGKAVHFVTFYMPLWGAILYNGFTYFQVIRMLNNATRMAVGMSGQAFVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDFFEPNHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKFWPERLYRWLPNNLKYKNLQQESELVLFKTEDQ 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0506 318 PRINTS GCR1-cAMP receptor family signature 80 98 IPR022343 -
Ssu5g0506 318 PRINTS GCR1-cAMP receptor family signature 30 48 IPR022343 -
Ssu5g0506 318 PRINTS GCR1-cAMP receptor family signature 49 64 IPR022343 -
Ssu5g0506 318 PRINTS GCR1-cAMP receptor family signature 221 239 IPR022343 -
Ssu5g0506 318 PRINTS GCR1-cAMP receptor family signature 253 272 IPR022343 -
Ssu5g0506 318 Gene3D - 11 294 - -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 172 195 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 159 171 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 82 95 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 52 74 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 245 262 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 263 279 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 36 50 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 19 34 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 97 115 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 120 135 IPR022340 -
Ssu5g0506 318 PRINTS Putative plant GPCR, GCR1, signature 215 236 IPR022340 -
Ssu5g0506 318 PANTHER TRANSMEMBRANE PROTEIN 116 10 305 - -
Ssu5g0506 318 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 19 273 IPR017981 GO:0004888|GO:0007166|GO:0016021
Ssu5g0506 318 SUPERFAMILY Family A G protein-coupled receptor-like 13 287 - -
Ssu5g0506 318 Pfam Slime mold cyclic AMP receptor 26 272 - -
Ssu5g0506 318 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 10 305 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0506 K22987 - gmx:100794547 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0506 5 10854638 10863170 Ssu5g0506 5 10854638 10863170 ECH