Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0504 ATGGCTGCGAAGGTTTTAAAGGAAGCGAAGTCGCTGACGGCTGTGGAGGCGGGGGAGGTGGACACGGCGGTGTCGTCGGTGAAGTGCTGCTGCTGCGGGCTGATGGAGGAGTGCACGCACGCGTACATTGCGCGCGTGAGGGAGAGGTACGGGGGTCGTTGGATTTGCGGTTTGTGCGCGGAGGCAGTGAaggaagagagggagagagagaagattgtCATAACAACGGACGAGGCTCTGAAGCGACACACGAGGTTCTGCCAACAGTTCAAGTCTTCGACTCCTCCCGACAACACCAACGAGGATTTCATCCTCGCGGTGAAGCAGATCCTGTTTCGCACTTTGGATTCTCCCAGGAAAGACCGTTTCACTTGTCGACCTCTTGGTAGATCTCACAGCTGCTTCTCAACCATGCAAGGAACTCCCACACAGGCCGAGACAGAGTGA 447 0.5369 MAAKVLKEAKSLTAVEAGEVDTAVSSVKCCCCGLMEECTHAYIARVRERYGGRWICGLCAEAVKEEREREKIVITTDEALKRHTRFCQQFKSSTPPDNTNEDFILAVKQILFRTLDSPRKDRFTCRPLGRSHSCFSTMQGTPTQAETE 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0504 148 Pfam Protein of unknown function (DUF1677) 24 113 IPR012876 -
Ssu5g0504 148 PANTHER OS01G0745000 PROTEIN 15 139 IPR012876 -
Ssu5g0504 148 PANTHER DUF1677 FAMILY PROTEIN 15 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0504 Ssu-Chr5 10837440 10837886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0504 - - gmx:100795601 262.692