Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0501 ATGGAAATTGAGCAAGACCCTCTTCCTCCTCTCTCTAGTGCTTACAGCCAAAGCCTAGTGAAACAGCTAACCACCTCAAAACCAAAACACACCACCATGAACACCAAAGACCCAAGTTGTGTTGTTGTTGACGGTAATGTTACcccaaatcaaaatataagaaaacatgcccaacaacaacacaaaaagCAAGTTAGAAGAAGACTCCACACTAGTAGGCCTTATCAAGAAAGGCTTCTGAATATGGCAGAGGCAAGGAGGGAGATTGTCACTGCCTTGAAATTCCACAGGGCAGCTATGAAACAAGCTAGTGAGGACCAGCAACAGCAGCAACagcaacaccaccaccaccaacaacaacaatcactaTCCTTGCAGTCTTCCCATCTTTCAAGTTTTGACCAAGATGGAAGATTCAAGTCTAGAAGAAATCTTAGGATATACCCATCATGCAcaaccaaaatttcaaattacatgGATGATTTTTCCTACTCATCCTTCTCATCCCATTCTCCTCCTCCCGTTCCAAACTCTTACCCCAACCCCAGCCCTGTTACTTCCCCATTTGCTCATCCACCCCCTAAGGCAGAAAATCCCATTTTCACCTTGCCAAACCAGACATTAGGATTGAACCTCAATTTACACCATTTCAACAATTTAGAAGCTACCCTTTTCCTTAACAACAGCAACAGCAATAACTCATCATTGTGCTCTTACTCATCTCCAACATCATCTTCCCATCCACTTTCTGTTGTGGCCGATCAAGATGTTCCTTCAATTGGAATCTCACAGGGGGAAGGGGTTTCCTCAGTGGTGGATACCTTTGAATCCAGTGCCACAATCCAGGCTACTGGAGGCATGCATACAGCCATGGATGATGAGGGCATGGCAGAGATCAGATCATTGGGAGAGCAACATCAAATGGAATGGAATGACACCATGAGTTTGGTCACTTCAGCTTGGTGGTTCAATTGCTTAAAGCACATGGAACATGATGCACAGGAAGTCAAGACTGAAGATGGTACATGTCATATCTTTGATCAGTTTCCAACCTGGTTGAATAATGCACACGAGAGATGCTTAGAACAGTGCTCCGAGGATTACTTCCAAGATCCTACCTCACCTTGGTAA 1131 0.4076 MEIEQDPLPPLSSAYSQSLVKQLTTSKPKHTTMNTKDPSCVVVDGNVTPNQNIRKHAQQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRAAMKQASEDQQQQQQQHHHHQQQQSLSLQSSHLSSFDQDGRFKSRRNLRIYPSCTTKISNYMDDFSYSSFSSHSPPPVPNSYPNPSPVTSPFAHPPPKAENPIFTLPNQTLGLNLNLHHFNNLEATLFLNNSNSNNSSLCSYSSPTSSSHPLSVVADQDVPSIGISQGEGVSSVVDTFESSATIQATGGMHTAMDDEGMAEIRSLGEQHQMEWNDTMSLVTSAWWFNCLKHMEHDAQEVKTEDGTCHIFDQFPTWLNNAHERCLEQCSEDYFQDPTSPW 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0501 376 MobiDBLite consensus disorder prediction 173 187 - -
Ssu5g0501 376 MobiDBLite consensus disorder prediction 166 187 - -
Ssu5g0501 376 MobiDBLite consensus disorder prediction 102 134 - -
Ssu5g0501 376 MobiDBLite consensus disorder prediction 10 38 - -
Ssu5g0501 376 MobiDBLite consensus disorder prediction 99 137 - -
Ssu5g0501 376 MobiDBLite consensus disorder prediction 1 38 - -
Ssu5g0501 376 PANTHER E1A-BINDING PROTEIN P400-LIKE 9 375 - -
Ssu5g0501 376 Coils Coil 93 120 - -
Ssu5g0501 376 PANTHER E1A-BINDING PROTEIN P400-LIKE 9 375 - -
Ssu5g0501 376 MobiDBLite consensus disorder prediction 54 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0501 Ssu-Chr5 10598680 10599810 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0501 - - gmx:100808969 362.844