Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0499 ATGGAAATGGCTTCCTCCTCCTTCATCTTAGGCTCAAATTTCAAATGCATATTCTCTTCGAGGAACGCTAAAACCCTGTCTGGGATTGGTGCACTGAGACACCCACACCCAAATGGTTTATTCAGCAAATGCTTCCATTCTCACACTTTATCTACTAGAATGGTGTCAGGGACTACAAGGATGGTTTCTGATGTTTATGCTGGTGGAGACTCAAGTTTCAGAGTCAATAGCAAGATGTACACCATGTTGGACTCTTGTTTGGTGATACCCCCTATCCCAAATCGTGCCAAGCCTCGAGCCATAATCAAATTCCTGGGTGGTGCCTTCATTGGTGCTGTTCCTGAAGTTActtatggCTACCTGATAGAATTTTTGGCAAAGATGGGTTTTCTTGTGGTGGTGGTGCCTTATAATGTGACATTTGACCATTCTCTAGCTGCTAAACAAGTATATGAGAGGTTCCAAGCTTGTTTGGGTACAATCCTGACATCTGGGTTGCCTCAAGCCAATTTGTCACCTGCTCAACTTGAAGACCTTCCTCTTTTCTCTGTTGGCCATAGCAATGGTGCACTTCTTCAAGTACTCACAGGAAGCTTGTTTTCTGAGAAAATACCTAAGGCCAATGCCATAATCTCTTACAACAACAGACCAGCAACGGAGGCAGTCCCTTACTTTGAACAGTTGGGTCCTGCAGTCAGCCAAATGATGCCAGTTGTGGAGGCAACTCCTTTTTATTCAATAGCTAGAAATGCATCAGGAGATGCATGGAAGATGACATTGGATGCTGTTAGATCAATTCTACAGGAAACTGAGCAGGAAATACTGAATTCCTTAACTAAATTTGTTGATCAGTTACCATCAGTAATGAATGAGGTTACACAAGGAGTATCAGAGTTCAAGCCGACACCATCTGAAAACCGTGATTGCTTTAAATGTTCATACAATGTTGAACACACCCTATTGGTGAAGTTCAATTTTGACACAATTGATGAGACAGATATTCTTGAAGAAACATTAAAGCCTCGTGTGGAGTCATTGGGTGGGACATTAGAAAAAGTAACATTAAGTGGTAATCACATCACACCATGCATTCAGGAACTGAGGTGGCAAGTGGGTAAATTGTATACTCCAGCAGATGCTGTTGCTCAGGGGCTTAAATCTCTTTCTTTGAATGAGACCAGGATCCTTGCCAGAACCATTAGCGACTGGTTCAGACAGTTTGAGGGTTGA 1230 0.4236 MEMASSSFILGSNFKCIFSSRNAKTLSGIGALRHPHPNGLFSKCFHSHTLSTRMVSGTTRMVSDVYAGGDSSFRVNSKMYTMLDSCLVIPPIPNRAKPRAIIKFLGGAFIGAVPEVTYGYLIEFLAKMGFLVVVVPYNVTFDHSLAAKQVYERFQACLGTILTSGLPQANLSPAQLEDLPLFSVGHSNGALLQVLTGSLFSEKIPKANAIISYNNRPATEAVPYFEQLGPAVSQMMPVVEATPFYSIARNASGDAWKMTLDAVRSILQETEQEILNSLTKFVDQLPSVMNEVTQGVSEFKPTPSENRDCFKCSYNVEHTLLVKFNFDTIDETDILEETLKPRVESLGGTLEKVTLSGNHITPCIQELRWQVGKLYTPADAVAQGLKSLSLNETRILARTISDWFRQFEG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0499 409 PANTHER OS04G0405600 PROTEIN 46 406 IPR010765 -
Ssu5g0499 409 Pfam Protein of unknown function (DUF1350) 96 404 IPR010765 -
Ssu5g0499 409 PANTHER INITIATION FACTOR 4F SUBUNIT (DUF1350) 46 406 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0499 - - gmx:100799131 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0499 5 10560196 10565381 Ssu5g0499 5 10560196 10565381 ECH