Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0488 ATGCACTATGAACATTTGAATCCAATCCCCAACTCAGCACTGCAGCGTGAAGCCAAAATGGAGCATCAATACCATCAAGCCACAGATGGGCTTCTGAACCTTTTCACAAAAGCCAATCACGATCTCTCTATGGTTCACCATCGCCTCGAAAAGGAGTTTCAACAGGTTTACCCCGACAATGCTAACCCTATGAAGCTGGTTTCAAGGATCAAGAAGGTTCAGGAAGATATATCAGCCTTGAAGGGGCAGTGCCGTGAGCTTCTGGCTGCTAAGCAGGATTTGATTGATAAGGCTCAGAGAGTTCTGGTGGAGAACAGAAATTTGGTGCAGCGGATGCAAGCATCAGTGGGCATCTCCCCCACTGGTGAAGATGATGCTGCATTCACTAACTTCAAACAgGTAATTGAAGAATGGACAGCACAAATAAGATCCAAAACAGGGAATGAAACACATGATTCTGATTCTGGAGATCTCAACAAACTACTGTTCTCGGCTATAGTTCAAAGTAATTGA 513 0.4444 MHYEHLNPIPNSALQREAKMEHQYHQATDGLLNLFTKANHDLSMVHHRLEKEFQQVYPDNANPMKLVSRIKKVQEDISALKGQCRELLAAKQDLIDKAQRVLVENRNLVQRMQASVGISPTGEDDAAFTNFKQVIEEWTAQIRSKTGNETHDSDSGDLNKLLFSAIVQSN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0488 170 Pfam Spindle and kinetochore-associated protein 2 25 131 IPR042091 -
Ssu5g0488 170 Gene3D - 19 138 - -
Ssu5g0488 170 Coils Coil 70 97 - -
Ssu5g0488 170 PANTHER SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2 20 170 IPR026762 GO:0000940|GO:0005876|GO:0007059|GO:0008017|GO:0051301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0488 K26095 - gmx:100500198 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0488 5 10290939 10296038 Ssu5g0488 5 10290939 10296038 ECH