Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0485 ATGGGATGGAGGTACTATGCTGGGTTGGGACTGATTGGAGCTTTTGTCTTAATATGGGTCAGCTCTGCAGAAATAACTCAGAGGATTTTTGTCGAGTATAAACAGCCGTTTGCACTCACTTACCTTGGAGTATCTGTGATGGTgatctattttctcatttcagTTTTCAGAAAGTGGATATGTAGCTTACTGAAAATTTTGTTCAGAAACTTCCATGAGGACTACGCATTAGTTAGCATTTCCACTGGACTAGATGCCCCTTTTAGAATCGATGGGATTCTCCTAAGGCCAGAAACTGATCTAAAAAGTAGTTTGATTACTGACAAAGaaattagagaaagagaagaagggaTGCCTTTGGACAAGAAAGAGGAAGATGAACCTTCCTTGCTAGCACGAAGTTATGAAAGTAGTTCATGGAAAATTGCTAAGTGTGGCTTGTACCTCACTCCAATATGGTTTGCACAAGAGTATTTTTCAAACATGGCACTTGCAAATACTAGTGTTACGAGTACAACAGTTCTGAGTTCCATGTCAGGTCTCTTTACCCTTTTCTTTGGAGCCATTCTTGGCCAGGACTCGGTAAATATAACCAAAATAGCAGCTGTTTTAATCAGCATGGCTGGTGTTGTCATGACAACTGTTGGGAAGACTTGGGCAGCAGATGAGCAGATCAGCGTATCTGAGACACAGAAGCATTCTATCATAGGGGACATTTTTGGTCTACTCTCAGCAATATGTTATGGCTTATTCACAGTGCTTCTCAATAATTCTGCCGGATCAGGAGACAAAGTAGACATGCAAAAGCTTTTTGGCTGTATTGGTCTCTACAGTTTTCTTGGCTTTTGGTGGCTAGGTATGGACTACTTTTTGGGAAATTTTGCACAATAG 891 0.3917 MGWRYYAGLGLIGAFVLIWVSSAEITQRIFVEYKQPFALTYLGVSVMVIYFLISVFRKWICSLLKILFRNFHEDYALVSISTGLDAPFRIDGILLRPETDLKSSLITDKEIREREEGMPLDKKEEDEPSLLARSYESSSWKIAKCGLYLTPIWFAQEYFSNMALANTSVTSTTVLSSMSGLFTLFFGAILGQDSVNITKIAAVLISMAGVVMTTVGKTWAADEQISVSETQKHSIIGDIFGLLSAICYGLFTVLLNNSAGSGDKVDMQKLFGCIGLYSFLGFWWLGMDYFLGNFAQ 296
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0485 296 Pfam EamA-like transporter family 150 214 IPR000620 GO:0016020|GO:0016021
Ssu5g0485 296 PANTHER THIAMINE-REPRESSIBLE MITOCHONDRIAL TRANSPORT PROTEIN THI74-LIKE ISOFORM X1 1 286 - -
Ssu5g0485 296 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 217 - -
Ssu5g0485 296 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 286 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g0485 Ssu-Chr5 10249439 10253236 Dispersed/Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0485 K15289 - gmx:100805891 477.633