Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0475 ATGGGTGGAGGAGAAGAAGAGTGGAAGAAAATGAATCCACAACAAGCACAAGCGGAAGCCTCAAAGAGACCCCCAGGTCATGGCGCTACCGAAGTACTTCATCAGAGGAAATCGCTTCCTTTCAACTACGCCACAATGACTGTAGCTGGATTGCTTATTACAGCTGCCGTGGGATACACTGTCTTATACATCAAGAAGAAGCCCGAGGCTAGTGCTAAGGATGTAGCAAAGGTTTCTGTCGGAGTTGCAAATCCTGAGGACACTCACCCTAAGAAATAG 279 0.4767 MGGGEEEWKKMNPQQAQAEASKRPPGHGATEVLHQRKSLPFNYATMTVAGLLITAAVGYTVLYIKKKPEASAKDVAKVSVGVANPEDTHPKK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0475 92 MobiDBLite consensus disorder prediction 1 32 - -
Ssu5g0475 92 PANTHER OS09G0127700 PROTEIN 8 92 - -
Ssu5g0475 92 PANTHER OS09G0127700 PROTEIN 8 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0475 Ssu-Chr5 9953879 9954157 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0475 - - pvu:PHAVU_001G041500g 147.902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0475 5 9953879 9954157 Ssu5g0475 5 9953879 9954157 ECH