Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0466 ATGTCCTCTACGGCTTTCTCTGCCACATTCTTCACACCCCTCCATGATTTCACTCAAGCCAGAACAAACCCAGCTACTTCACCCCCTTTGCCTTTCATCAAATCCTCCTTTGCTTCCTCCAAGTCAACCTTTTTTCAACCTGCCCTTTCTCTACAAACCTCATCCAATTTTCCCAGGCCTTTTATAAAGCCCAGGTCTTTCTCAGTTCATGCAACGGCTGCCACAGAAAAAACCATTTATGATTATACTGTCAAGGATATTGACAGAAAGGATGTTTCTCTTAGCAAATTTAGGGGGAAGGTTCTATTAATTGTCAATGTTGCTTCACGATGTGGTTTGACATCATCGAATTACTCGGAGCTGTCAcgtttgtatgaaaaatataagaatcaaGGTTTGGATATTCTAGCTTTCCCCTGCAATCAATTTGGTATGCAGGAGCCTGGATCAAATGAAGAAATTAAGCAGTTTGCTTGCACTCGATATAAAGCTGAGTTTCCAATTTTTGATAAGGTTGATGTCAATGGACCATTTACAGCTCCAGTGTACCAGTTTCTGAAATCAAGTGCTGGAGGCTTTCTGGGTGATCTTATAAAGTGGAATTTTGAGAAATTCTTGGTTGATAAAAGTGGTAAAGTTGTTGAAAGATACCCACCAACAACATCTCCTTTTCAAATTGAGaaGGATATCCAGAGGTTACTTGCTGCTTGA 711 0.3938 MSSTAFSATFFTPLHDFTQARTNPATSPPLPFIKSSFASSKSTFFQPALSLQTSSNFPRPFIKPRSFSVHATAATEKTIYDYTVKDIDRKDVSLSKFRGKVLLIVNVASRCGLTSSNYSELSRLYEKYKNQGLDILAFPCNQFGMQEPGSNEEIKQFACTRYKAEFPIFDKVDVNGPFTAPVYQFLKSSAGGFLGDLIKWNFEKFLVDKSGKVVERYPPTTSPFQIEKDIQRLLAA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0466 236 ProSiteProfiles Glutathione peroxidase profile. 69 236 IPR000889 GO:0004602|GO:0006979
Ssu5g0466 236 PRINTS Glutathione peroxidase family signature 133 149 IPR000889 GO:0004602|GO:0006979
Ssu5g0466 236 PRINTS Glutathione peroxidase family signature 198 207 IPR000889 GO:0004602|GO:0006979
Ssu5g0466 236 PRINTS Glutathione peroxidase family signature 97 114 IPR000889 GO:0004602|GO:0006979
Ssu5g0466 236 PANTHER PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC 16 236 - -
Ssu5g0466 236 ProSitePatterns Glutathione peroxidases signature 2. 136 143 IPR029760 -
Ssu5g0466 236 CDD GSH_Peroxidase 78 230 IPR000889 GO:0004602|GO:0006979
Ssu5g0466 236 Pfam Glutathione peroxidase 79 187 IPR000889 GO:0004602|GO:0006979
Ssu5g0466 236 PANTHER GLUTATHIONE PEROXIDASE 16 236 IPR000889 GO:0004602|GO:0006979
Ssu5g0466 236 SUPERFAMILY Thioredoxin-like 78 235 IPR036249 -
Ssu5g0466 236 ProSiteProfiles Thioredoxin domain profile. 73 235 IPR013766 -
Ssu5g0466 236 ProSitePatterns Glutathione peroxidases active site. 99 114 IPR029759 -
Ssu5g0466 236 Gene3D Glutaredoxin 65 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0466 Ssu-Chr5 9838958 9843287 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0466 K00432 - gmx:100305775 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0466 5 9838958 9843287 Ssu5g0466 5 9838958 9843287 ECH